Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1326 ATGCCAACCGAGACAACCCGGCAATCCGCTCAGCCAGATTCTAGATTCTCGCCACGTGTCGTTTTAGATATTCCAATTGGCCGCCCTTTAATTGACTCTTCCTATCCAAATCCTCCTTCCAAAATCAGATTCCCCTGTTCTCGCTTCTCCGCATATCGATCTTCATTTCATGCAATGATTAATGTATCCAGTCAATCCGGCCGCCGCATTCTTTCGTTCCCGGCGGTGCACCCTTGCGAAGGAATATCTCCGGCGACCCTTCTCGCCTCCTTGATTTCTCTCTCTCAGTCCATATGCGGTTTCCGATCCAAGTTCTTCCCCACTCAACGACGAAACTCCAAAGAAATAATCCGCCAAATCGGTATCATCCTCCTCTTCCTCGAGGAAATTCGAGACCGCGGCGTCCCCATAAAGGACTCCCTCGCTCTCTGCTTCTCCGAGCTCCACTTGAGTTTCCAAAAAATCCACTTCTTACTGTCCGATTGTACTCGTGACGCTGCTCGTCTCTGGATGCTAATGAAATCAGAAAACGTCGCCGCTCAATTCAGGGTTCTGACTCGCGCGGTGGCCACTGCTCTCGACGTTTTGCCTCTGAATCGGATCGAGATTTGCGATGAAGTGAAAGAGATAGTGGAATTAGTGGCCAAGCAGGCTCGGAAAGCGAGGTTCGAAATAGACCCCCATGAGGAGCAAACCGGCACGCGAGTCCGTTCGGTTTTGCTTCAATTCGAGAGGGCAATCGAATCCGACTTGGCTTCCATAAAGCGAATCTTGGACTACCTCGAAATCAAGAACTGGAATGAATGTAACAAGGAGATCAAATTCTTGGAAGAAGAAATCAGCTTTAATTGTTCTAACGGTGACGAGAGGGAGGTTCCTTTTTTGACTAGTTTAGTTGGGTTCTTATGCTATTGCAGGGTAGTGATATTCGAAACTCTGGATTTTCAACACACCACCACTGATCCATCAGAGGCAAGGTGTAGCACGGAGATGATTAGTTTCCTCAACACCGAGGATTTTCGGTGTCCTATTTCACTTGAACTAATGACCGACCCTGTAACTATATCAACTGGTCAGACTTACGATCGAGCTTCCATTCAGAAATGGCTCAAAGCTGGAAACAGGATATGCCCGAAAACGGGGGAGAAGCTGACAAACACCGAGCTCGTTCCAAACACAACGCTGAAAAAGTTAATCCAACAATTCTGTGCCGATACCGGCTTTCCCCTCACCAAGTCCGGTCACCGGAGAAGTGACATAACGAAGACCGTCGTCCCCGGCAGCACGGCATCAGCCCACGCCATGCAGTTTCTTTCCTGGTTCATCGCTCGGAGGCTTGTGTTCGGAACAAGTGAGCAGAAGAACAAAGCAGCTTACGAGATTCGTCTCGTTGCAAGGTCCAACATTTTCAACAGATCGTGTTTGATTGAACTCGGAACTGTACCCCCATTGCTGAACCTCTTGGATACAAACGATAAATCCACTCAAGAGAACGCAATCTCTGCTCTTTTGAAGCTGGCAAAGCAAAAAATTGGGCAGGACGTGATAATGGAATGTGGGGGTCTAATCCCAATCGTTGGAGTTCTCAAAAGAGGAGTCACTCTAGAAGCTCGCCAAATCGCAGCCGCTACAATATTTTACCTCTCTTCCACAAAGGAACACAGAAAAACAATAGGAGAAAATCCAGAAGCCATTCCAGCTTTGGTGGAACTAATCAAGCAAGGAGATACAGCAACAACAACGTACGGGAAGAAGAATGCCGTGGTTGCAATCTTCGGGCTTCTGCTTCTTCCTCGGAATCATCAAAAAGTACTCCAAGCTGACACTGTGCCTGCATTAGTTAGTGCATTAACATTATCTTCCTCGAACCACTTCGACCTTGCTACTGATTGTCTAGCAGTTCTGGCAGCCTTGGCGGAGACTGGAGAGGGAGCAAATGCCATATTTCAAGCTTCTGCTTTGGCTTTGATCACTGGGATTTTGCAGTCCGCGGCGACGTCGCGTGCGGGGAAAGAGCATTGTGTGTCGATTTTGCTGTCGCTGTGCGTGCATGTCAAAGAAGAACTGGTAGGTGTTCTGGCCAAGGATTCTTCGTTGATGCCTTCGCTTTACTCGCTCCTCACTGGTGGGACTTCTCATGCGGCCAAGAAAGCACGTTCGCTGATTAGAGTTCTGCAAGAATTCAATGAAAAAAGAACTTCTGAGTGGGTTGGTTCCTCAGTTGCGAGGGATCGACCTGTTCATGTTCGGTGA 2253 0.4825 MPTETTRQSAQPDSRFSPRVVLDIPIGRPLIDSSYPNPPSKIRFPCSRFSAYRSSFHAMINVSSQSGRRILSFPAVHPCEGISPATLLASLISLSQSICGFRSKFFPTQRRNSKEIIRQIGIILLFLEEIRDRGVPIKDSLALCFSELHLSFQKIHFLLSDCTRDAARLWMLMKSENVAAQFRVLTRAVATALDVLPLNRIEICDEVKEIVELVAKQARKARFEIDPHEEQTGTRVRSVLLQFERAIESDLASIKRILDYLEIKNWNECNKEIKFLEEEISFNCSNGDEREVPFLTSLVGFLCYCRVVIFETLDFQHTTTDPSEARCSTEMISFLNTEDFRCPISLELMTDPVTISTGQTYDRASIQKWLKAGNRICPKTGEKLTNTELVPNTTLKKLIQQFCADTGFPLTKSGHRRSDITKTVVPGSTASAHAMQFLSWFIARRLVFGTSEQKNKAAYEIRLVARSNIFNRSCLIELGTVPPLLNLLDTNDKSTQENAISALLKLAKQKIGQDVIMECGGLIPIVGVLKRGVTLEARQIAAATIFYLSSTKEHRKTIGENPEAIPALVELIKQGDTATTTYGKKNAVVAIFGLLLLPRNHQKVLQADTVPALVSALTLSSSNHFDLATDCLAVLAALAETGEGANAIFQASALALITGILQSAATSRAGKEHCVSILLSLCVHVKEELVGVLAKDSSLMPSLYSLLTGGTSHAAKKARSLIRVLQEFNEKRTSEWVGSSVARDRPVHVR 750
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1326 750 CDD RING-Ubox_PUB 338 389 IPR045210 -
Bisa02g1326 750 PANTHER U BOX DOMAIN-CONTAINING 136 725 - -
Bisa02g1326 750 SUPERFAMILY ARM repeat 451 726 IPR016024 -
Bisa02g1326 750 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 479 521 IPR000225 GO:0005515
Bisa02g1326 750 FunFam RING-type E3 ubiquitin transferase 416 736 - -
Bisa02g1326 750 SMART arm_5 467 508 IPR000225 GO:0005515
Bisa02g1326 750 SMART arm_5 597 640 IPR000225 GO:0005515
Bisa02g1326 750 SMART arm_5 509 550 IPR000225 GO:0005515
Bisa02g1326 750 SMART Ubox_2 339 402 IPR003613 GO:0004842|GO:0016567
Bisa02g1326 750 FunFam RING-type E3 ubiquitin transferase 336 407 - -
Bisa02g1326 750 Gene3D - 427 736 IPR011989 -
Bisa02g1326 750 Pfam U-box domain 338 404 IPR003613 GO:0004842|GO:0016567
Bisa02g1326 750 Pfam Armadillo/beta-catenin-like repeat 471 507 IPR000225 GO:0005515
Bisa02g1326 750 ProSiteProfiles U-box domain profile. 335 409 IPR003613 GO:0004842|GO:0016567
Bisa02g1326 750 SUPERFAMILY RING/U-box 338 409 - -
Bisa02g1326 750 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 337 409 IPR013083 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1326 Bisa-ChrBisa02 22575653 22577905 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1326 59 748 U-box Gene Family AT1G60190 39.828 3.02e-168 499