Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1324 ATGAGAGCGAGCGAAACAGCTTGCCGTCGCCGCAATCTGAGGTTGAAGGTTATGGTGACAGCGTTTTTCATTTCTCTGATTCTGCTGTTTCTGGGTATCGCTGTTTTGGTTCTGATCCATGTATGCATCGTAGGGAAGTCTCTCCGGAGAGGGAATGAAGAACAGAGTGATGATGGGATTGTGAGGAACAGAGTCTGCGAAGGTGATGAGGTGAAGAACCTTCCTTGCTTTGAGTATAAGGAAGCAGGGAAGGGAGGAGGAAGCACTGTGGATTGTGCTGTTTGCTTGGAGAGCTTCAAGGTGGGTGATATGTGCAGGTTTTTGCCTAATTGCAGCCATAGCTTTCATGTCCCCTGCATAGACTCGTGGATTCTCAAGACCCCCATTTGTCCAATTTGTAGAGCATGGGTTCATTCGCCAATGATTCCCATGGTTCTTGGCGAAGAGATAGATGTTTCAGACAGTGCTGCATTTGAAACTGTATAG 486 0.4733 MRASETACRRRNLRLKVMVTAFFISLILLFLGIAVLVLIHVCIVGKSLRRGNEEQSDDGIVRNRVCEGDEVKNLPCFEYKEAGKGGGSTVDCAVCLESFKVGDMCRFLPNCSHSFHVPCIDSWILKTPICPICRAWVHSPMIPMVLGEEIDVSDSAAFETV 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1324 161 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 51 140 IPR013083 -
Bisa02g1324 161 PANTHER E3 UBIQUITIN-PROTEIN LIGASE RNF13-LIKE 14 141 - -
Bisa02g1324 161 FunFam RING-H2 finger protein ATL2K 66 140 - -
Bisa02g1324 161 SUPERFAMILY RING/U-box 91 140 - -
Bisa02g1324 161 ProSiteProfiles Zinc finger RING-type profile. 92 134 IPR001841 -
Bisa02g1324 161 SMART ring_2 92 133 IPR001841 -
Bisa02g1324 161 Pfam Ring finger domain 91 134 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1324 Bisa-ChrBisa02 22551442 22551994 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1324 54 141 C3H Transcription Factor Family AT2G18670 39.130 7.87e-18 74.7