Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1320 ATGGCTATCAGAGGCGTCGATTTTAAATGGTTCCTCTCAATCCTTTATCGCATGCCCTGTTTGTTTGTGTGTTTCGGGTACGATGGGTTTTTCTTGTCGATGCTGGCCACCAGTGTAGTTATTGTCGCTATTAATTGGAAGCGATATCATTCTTGTACATACCCGTTGCACATATGGATTGTGGTTGACTATACTACTGTGTTTATCTTTCGGCTAATGATGTTTGTTGATAATGGACTTTCTGCTGGAATGGGTTTAGACTTTGGGTGGCAGCAGAGATATGCTCGCTTCTGTGGAAGAGTAGCAGTCCTTTCAATCCTTGCTTTGCTTCTATATCCATTTCTTTGGGCTTGGACTATAGTTGGTACCCTTTGGTTCAGCAGTGCCAGGAACTGTTTGCCAGAAGAGGGTCAGAAATGGGGCTTCCTCATCTGGTTACTTTTCAGCTACTGTGGACTGCTTTGTATTGCTTGCATGTCATTAGGGAAGTGGTTTGCACGAAGACAAGAACACTTGTTACGTGCTCAGCAGGGGTTTCCTATATCTGAATATGGAGTTCTGGTTGACATGATCCGAGTGCCTGATTGGGCATTTGAAGCTGCAGGTCAGGAAACAAGAGGCATGGGCCAAGATGCTGGCACATATCATCCTGGTCTTTACTTAACTCCAGCTCAGAGAGAAGCAGTTGAAGCTTTAATTCAAGAACTGCCAAAGTTCAGGTTCAAGGCTGTTCCAACTGACTGCAGTGAATGTCCCATCTGCTTGGAAGAATTCCATGAGGGGAATGAGGTCCGTGGCCTGCCTTGCGCTCACAATTTCCATGTTGAATGCATTGATGAGTGGCTTCGACTTAATGTAAAATGTCCTCGGTGCCGCTGTTCGGTATTTCCAAATCTTGACCTTAGTGCTCTATCCAATCTCCGCCCTGAATCAGAACGATCTGCTGCCAGTGTTTTGACAACAGCCAGATATGTGAGAGACCAACCTTCTAGTCAGAGCTATTTGTTAAGATTACAGGGTCTTCTCCGCCCAGTGCGTTTGGAAATTGCCAGGCCAGGTGATGATGTGGATAATGCTTTGGAAAATGCTGAAAATGGTTGTGTCACTGTTGTGACTCGAAATGCATCAATTGGAGACCAAGCCCCGTCCGTCGAATGCATGCCTGTCAGTCTATCCTCTGAACAAAATTAG 1191 0.4551 MAIRGVDFKWFLSILYRMPCLFVCFGYDGFFLSMLATSVVIVAINWKRYHSCTYPLHIWIVVDYTTVFIFRLMMFVDNGLSAGMGLDFGWQQRYARFCGRVAVLSILALLLYPFLWAWTIVGTLWFSSARNCLPEEGQKWGFLIWLLFSYCGLLCIACMSLGKWFARRQEHLLRAQQGFPISEYGVLVDMIRVPDWAFEAAGQETRGMGQDAGTYHPGLYLTPAQREAVEALIQELPKFRFKAVPTDCSECPICLEEFHEGNEVRGLPCAHNFHVECIDEWLRLNVKCPRCRCSVFPNLDLSALSNLRPESERSAASVLTTARYVRDQPSSQSYLLRLQGLLRPVRLEIARPGDDVDNALENAENGCVTVVTRNASIGDQAPSVECMPVSLSSEQN 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1320 396 SMART ring_2 251 291 IPR001841 -
Bisa02g1320 396 FunFam E3 ubiquitin-protein ligase SIS3 219 297 - -
Bisa02g1320 396 ProSiteProfiles Zinc finger RING-type profile. 251 292 IPR001841 -
Bisa02g1320 396 PANTHER E3 UBIQUITIN-PROTEIN LIGASE SIS3 27 375 IPR044793 GO:0004842|GO:0010182
Bisa02g1320 396 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 220 297 IPR013083 -
Bisa02g1320 396 Pfam Ring finger domain 250 292 IPR001841 -
Bisa02g1320 396 SUPERFAMILY RING/U-box 232 299 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1320 Bisa-ChrBisa02 22474493 22478909 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1320 74 376 C3H Transcription Factor Family AT3G47990 72.222 5.59e-157 442
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1320 02 22474493 22478909 Bisa02g1320 02 22474493 22478909 ECH