Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1311 ATGAACCGGGCTGATTTCTTGAAGAATGGAAGGCAACAGCAATTAATGGCAGGTGGATATGAGTATAAGAAGGGGCTATGGAATACAGAGGAAGACAGAATTTTAATGGATTACGTGAAGCGGCATGGAGTAGGCAAGTGGAATCGTATTGCTAAACTCACAGGGCTGAAGAGATGTGGCAAAAGTTGCAGACTAAGGTGGATGAACTATCTGAGTCCAAATGTGAAGCGTGGAGATTTCTCAGAGGAAGAAGACGACCTTATTATCCGCCTCCACAATCTCCTCGGAAATAGGTGGTCTCTGATAGCAGGGAGGGTTCCAGGGAGGACAGACAACCAAGTGAAGAACTACTGGAACACTCGTTTGAGCAAGAAAGTGGGTGTTAACAAGAAGGGGAAAACAAAATTGTGTCAGCCTCTGAAGTCTTTCTCCAATAAACCAAAGGATGTTACTCCCAATATCTCGTCAGATCCTAGTAAGAGACCTTCAAATTATAATGACAACAGTGATGAAGTTGAAAATTTTACGAAGACTAATACAGAATATTTCTCAAATATGCATGAGGTGATCATGAGTGATCTTGATTTTGAGTTGGAGAGTGCTTTTTGGTTTTCCAACAACACTGAAAATTCCACTTCTTTCTCAGACCCTTATCATGATTGCTTTGTTGACCTTGATTGGTCTGCCTTGTAA 693 0.4156 MNRADFLKNGRQQQLMAGGYEYKKGLWNTEEDRILMDYVKRHGVGKWNRIAKLTGLKRCGKSCRLRWMNYLSPNVKRGDFSEEEDDLIIRLHNLLGNRWSLIAGRVPGRTDNQVKNYWNTRLSKKVGVNKKGKTKLCQPLKSFSNKPKDVTPNISSDPSKRPSNYNDNSDEVENFTKTNTEYFSNMHEVIMSDLDFELESAFWFSNNTENSTSFSDPYHDCFVDLDWSAL 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1311 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 23 71 IPR017930 -
Bisa02g1311 230 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Bisa02g1311 230 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 72 126 IPR017930 -
Bisa02g1311 230 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 21 193 - -
Bisa02g1311 230 Gene3D - 79 153 - -
Bisa02g1311 230 SMART sant 23 73 IPR001005 -
Bisa02g1311 230 SMART sant 76 124 IPR001005 -
Bisa02g1311 230 Gene3D - 24 76 - -
Bisa02g1311 230 Pfam Myb-like DNA-binding domain 77 120 IPR001005 -
Bisa02g1311 230 Pfam Myb-like DNA-binding domain 24 71 IPR001005 -
Bisa02g1311 230 MobiDBLite consensus disorder prediction 140 171 - -
Bisa02g1311 230 FunFam MYB-related transcription factor 23 76 - -
Bisa02g1311 230 SUPERFAMILY Homeodomain-like 22 118 IPR009057 -
Bisa02g1311 230 CDD SANT 27 71 IPR001005 -
Bisa02g1311 230 CDD SANT 80 122 IPR001005 -
Bisa02g1311 230 ProSiteProfiles Myb-like domain profile. 72 122 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1311 Bisa-ChrBisa02 22370903 22373949 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1311 20 128 MYB Transcription Factor Family AT5G40330 81.651 2.72e-64 197
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g1311 Myb_DNA-binding 1.9e-15 CL0123