Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1290 ATGAAACCAGATGATCTTCCCCTTGGGGTTCCTAATTCATCACAGAGTTTCTTGCAAGACTTTAATTACCACATTGGCCATCATCACGATCAGTTTCACCCAAATGGGTCTTCTCCATCCAATCCAGTTTTTGAGGCCCAGTTTGATGCTTTTGATAACTTTGATGTTTATGAGTGCGAGCCTTTTTCTGAGAACAACAATGGTAATGTTATAATGGATGATGATTTTGAACACGGAAATCAAGTGGATATGAACCAAAGCTACGTGGTCTTTAATACTCAAGAAACGAAGCCTGTGGATTTTGCTGTACCAGATGATGAAGTGTCATCACTGAATTATTACAAAAGAGTTGGCTTCAAAACAAAAAATAATAGCGTTTCGTCTGTAAGCACCAGAAGGACGAGTTACAAACTTCGCAGGAAGTCCAACATAGTAAAGGGTCAATGGACCATAGAAGAAGATGGGTTATTGATTCAACTGGTGGAAGAATATGGAGTGAGGAAGTGGTCTCAAATTGCTCAGATGTTGTCTGGAAGAATGGGCAAACAATGCAGAGAGAGATGGCATAATCATCTGAGGCCTGACATAAAGAAGGAGACATGGACAGAAGAAGAGGACAAAATACTGATAGAAGCACATGCAGAAATAGGGAACAAATGGGCAGAGATAGCAAAGAGATTGGCAGGCAGGACAGAGAACTCCATCAAGAACCATTGGAATGCCACAAAGAGAAGCCAACTCTCCAAGAGAAAGTGTCGCTCTAAGTACCCTTCGCCCTCTCTTCTTCAACAGTACATTCGAAGCTTGAACTTACACCAAAACCCACCCAAAACATCATCATCATCATCATCATCATCATCTTCTTCTGCTGCTAATAATAATAATAATAATAATGCCAATATTGATGGTGATCGATTGGTGCCAAGTTATGATTTGTGTTTTGAATATGTGGGAGATGATGATATGGGTGAGAAGGGTTGTGAAGGAAAAACGATGGGATCAATGGTGGGGTTTGAAGTGAAGAAGGAGATGGATTTGGTGGAGATGATGTCTCAGGTCAATCAAGCTAATTGA 1074 0.406 MKPDDLPLGVPNSSQSFLQDFNYHIGHHHDQFHPNGSSPSNPVFEAQFDAFDNFDVYECEPFSENNNGNVIMDDDFEHGNQVDMNQSYVVFNTQETKPVDFAVPDDEVSSLNYYKRVGFKTKNNSVSSVSTRRTSYKLRRKSNIVKGQWTIEEDGLLIQLVEEYGVRKWSQIAQMLSGRMGKQCRERWHNHLRPDIKKETWTEEEDKILIEAHAEIGNKWAEIAKRLAGRTENSIKNHWNATKRSQLSKRKCRSKYPSPSLLQQYIRSLNLHQNPPKTSSSSSSSSSSSAANNNNNNNANIDGDRLVPSYDLCFEYVGDDDMGEKGCEGKTMGSMVGFEVKKEMDLVEMMSQVNQAN 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1290 357 Gene3D - 145 197 - -
Bisa02g1290 357 Pfam Myb-like DNA-binding domain 149 203 - -
Bisa02g1290 357 PANTHER MYB PROTEIN-RELATED 124 294 - -
Bisa02g1290 357 ProSiteProfiles Myb-like domain profile. 141 192 IPR001005 -
Bisa02g1290 357 ProSiteProfiles Myb-like domain profile. 193 243 IPR001005 -
Bisa02g1290 357 FunFam Transcriptional activator Myb isoform A 145 198 - -
Bisa02g1290 357 SUPERFAMILY Homeodomain-like 143 239 IPR009057 -
Bisa02g1290 357 CDD SANT 200 243 IPR001005 -
Bisa02g1290 357 MobiDBLite consensus disorder prediction 272 303 - -
Bisa02g1290 357 FunFam Transcription factor MYB119 199 263 - -
Bisa02g1290 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 197 247 IPR017930 -
Bisa02g1290 357 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 141 196 IPR017930 -
Bisa02g1290 357 SMART sant 145 194 IPR001005 -
Bisa02g1290 357 SMART sant 197 245 IPR001005 -
Bisa02g1290 357 Gene3D - 199 267 - -
Bisa02g1290 357 CDD SANT 149 192 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1290 Bisa-ChrBisa02 21891693 21893911 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1290 75 327 MYB Transcription Factor Family AT4G18770 50.181 1.55e-81 253
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g1290 Myb_DNA-bind_6 5.1e-17 CL0123
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1290 02 21891693 21893911 Bisa02g1290 02 21891693 21893911 ECH