Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1269 ATGGGTATCGAAATCGGAGGGAAAATAGAGAAGGTGAATGGGAAAGAATTGAGTTACAGTGAATTTGTGGAGAGGTATATGGAGAAGAACCAGCCCGTGGTACTCACAGGACTAATGGACGATTGGATTGCAGTCAGAGACTGGATCATCCGTAATGGTCAACCCAACCTTCAATTTTTCTCCTCGCAATTTGGGAGTTCTAAAGTTCAGGTTGCAGATTGTGGCACTAGAGAATTCACGGATCAGAAGAGGGAGGAGATGTCTGTTTCAGATTTTATCGGACGTTGGCTAGAGGGTTCTCCAGCACAGTGCAATACTGAAGATCATACTAGTAATGGTCAGTGCTCCGTATTGTATTTGAAGGACTGGCACTTTGTGAAGGAATACCCAGAGTATACAGCATACATCACTCCAGTGTTCTTTCATGATGATTGGCTCAACCTTTATCTTGACCACTACAGAATGCATACAGATCCCGACAGTTACCAACAAAATAATGAAATATGTTGCTCTGACTATCGTTTTGTTTATATGGGAAAGGAAGAATCTTGGACTCCTCTGCATGCTGATGTTTTCAGGTCATATAGTTGGTCATCAAATGTCTGTGGGAAGAAGAGATGGCTTTTTCTAGCTCCTCCTCAGAGTCATCTTGTATTTGACAGGAATGTGAAAAGCTGTGTGTATAATATTTTTGATGAAGTATGTGAATCAACATTTCCTGGTTTTAGAAAGGCTATCTGGTTAGAATGCATACAAGAAGCAGGTGAAATTATTTTTGTTCCCAGCGGATGGTACCATCAAGTTCATAATCTGGAGGACACTATATCTATAAACCACAACTGGTTCAATGCCTTTAACCTTTCTTGGGTGTGGAATTTACTTTTGAGGGACTACAATGAGGCCAAGGAATACATAGAAGACATCAAGGATATATGTGATGATTTTGAAGGTCTCTGCCAGCGCAATCTTTTTGCTAACACAGGGATGAACTTTTATGACTTCTTTACTTTTATAACACGCTTCACCTTAGCCAACTCGGCTCTGTTTTGCTATCTGAGTGGAAAATATGGAAGTCCCCCTGGAAGTTCAACAGTCACTCAACATTTAGTTTTGAATCTCAGATCTATAAGGAAGGTAGCATCAGAGATGAAATGTATGCATGCTCTGGAAGGAAATCATGATTACTCCCTCAACATAATCAAAATATTGGAAGATCCTAGGTTTTCCAAATTGTGTGCAAGTTTGGGAGGAACGTATTTGACGATACACGAGCAACCTTATTTGTCCTGTGAATTTGAGAAAGCTGCAGTTGATTATCTTATGCACCTTAATGTTGTGAAAGAATGCACCTCTTCTCAGGTCCACTCGCCTGAGGATCTCATCAAACTTATAGATAATGCTGTTGGAGAACTTGGTGACCATTAG 1425 0.4042 MGIEIGGKIEKVNGKELSYSEFVERYMEKNQPVVLTGLMDDWIAVRDWIIRNGQPNLQFFSSQFGSSKVQVADCGTREFTDQKREEMSVSDFIGRWLEGSPAQCNTEDHTSNGQCSVLYLKDWHFVKEYPEYTAYITPVFFHDDWLNLYLDHYRMHTDPDSYQQNNEICCSDYRFVYMGKEESWTPLHADVFRSYSWSSNVCGKKRWLFLAPPQSHLVFDRNVKSCVYNIFDEVCESTFPGFRKAIWLECIQEAGEIIFVPSGWYHQVHNLEDTISINHNWFNAFNLSWVWNLLLRDYNEAKEYIEDIKDICDDFEGLCQRNLFANTGMNFYDFFTFITRFTLANSALFCYLSGKYGSPPGSSTVTQHLVLNLRSIRKVASEMKCMHALEGNHDYSLNIIKILEDPRFSKLCASLGGTYLTIHEQPYLSCEFEKAAVDYLMHLNVVKECTSSQVHSPEDLIKLIDNAVGELGDH 474
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1269 474 Pfam Cupin-like domain 21 284 IPR041667 -
Bisa02g1269 474 PANTHER ARGININE DEMETHYLASE AND LYSYL-HYDROXYLASE JMJD 10 330 - -
Bisa02g1269 474 ProSiteProfiles JmjC domain profile. 126 298 IPR003347 -
Bisa02g1269 474 SUPERFAMILY Clavaminate synthase-like 8 310 - -
Bisa02g1269 474 Gene3D Cupin 3 283 - -
Bisa02g1269 474 SMART cupin_9 118 298 IPR003347 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1269 Bisa-ChrBisa02 21585972 21589860 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1269 7 290 Glycosyltransferase AT1G78280 25.000 1.27e-16 80.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Jumonji Bisa02g1269 Cupin_8 1.5e-24 CL0029
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1269 02 21585972 21589860 Bisa02g1269 02 21585972 21589860 ECH