Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1268 ATGCCTGTAAATCCATGGACCCTCTTCTTCTGCTTTTCTCTATCACTTCTTCACCATACTTTCACAGCTTTTGCAGTAAACCAGCAAGGCGAAGCTCTTCTTTCATGGAAGAGAACCCTGAAGGGGTCTCTGGAGGTGTTGAGTAATTGGAATCCAAATGACAGTACACCATGTGGGTGGTTTGGAGTTGACTGTAACTCCAACAACGAGGTTGTGAAATTAGATCTTAGGTATGTGGATTTAGTTGGAACCCTTCCTTCTAATTTCACCTCATTGCTTTCCCTCAACATGCTGGTCATAACAGAAACCAACCTCACTGGTTCAATCCCAAAAGAAATAGGCAATCTTAAAGAGCTCAGATACCTGGACTTGAGTGACAATGCCTTGACTGGTGAAATCCCAAGCGAGCTATGCTTCTTGACCAAGCTTGAGCAACTCCGTCTGAACTCAAACCAGCTTGTCGGGTCGATTCCAAGTGCAATTGGGAAACTCACAGAGTTGGTGTGGCTGGCTCTATATGACAATCAACTAAGTGGTGAAATTCCCAGAACCATAGGCAACCTCAAGAACCTGCAAGTGATGAGAGCTGGTGGAAACAAGAACATCGAAGGCTCTTTGCCTCAAGAAATAGGCAACTGTACTAAATTGGTCATGCTGGGTCTGGCTGAAACAAGTATATCAGGCTTTCTTCCTCCAACTCTTGGCCTTCTCAAGAAACTTGACACTCTTGCAATCTACACTTCTCTCCTCTCTGGCCAAATCCCCCCTGAACTCGGTGACTGCACCGAGCTTCAGAATATTTATCTCTACGAGAACTCCCTCACTGGATCCATTCCAAGCAAACTGGGAAACCTTAGAAACCTAAAAAATCTCTTACTCTGGCAGAACAGTTTAGTTGGCACCATCCCACCAGAGATTGGAAATTGCTATCAGTTATCTGTCATTGACATTTCCATGAACTCACTGACCGGAAGCATTCCCAAAAGTTTTGGGAATCTGACGTTGCTTGAAGAACTTCAGCTTAGCGTCAACCAGGTTTCTGGTGAGATTCCTGCAGAACTGGGAAAGTGTCAGCAACTCACTCACGTTGAGCTGGACAATAATCATATCACAGGTACGATCCCTTCTGACTTTGGGAACCTTAGGAATCTTACTTTGTTGTTCCTGTGGCATAACAAGCTCGAAGGAACCATACCATATTCCCTTTCCAAGTGTCAAAATCTGGAAGCTGTAGATCTGTCACAGAATGGATTGACGGGTTCCATACCAAAGGGGATATTCCAGCTCAAGAATCTGAACAAGCTCTTGCTACTATCCAACAATCTCTCTGGGAATATACCCCCTGAGATTGGAAACTGTACGTCTCTGATTCGGTTCCGAGCCAGCAACAATAAGATCACAGGGAACATTCCACCACAGATTGGGAATCTGAGGAATTTGAATTTCTTGGACCTCGGAAGCAACCGGATTTCAGGAGTTATTCCGGAGGAGATCTCAGGCAACCGGAATCTCACGTTTTTGGACCTACATTCCAACTTGATCGGCGGAAACTTGCCGGAAAGTCTCTGTCAGCTTGTCTCGCTTCAATTTATTGATGTCTCCGATAATATGATCGAAGGCACGCTTAGCACAAGGCTCGGATCGCTTGGCTCACTCACAAAACTCATCCTTGCAAAGAATCGTATCTCCGGGTCAATTCCGAGTCAACTCGGTTCTTGCGCGAAGCTTCAATTATTGGACCTCAGTAGCAACCAGCTCTCAGGTAACATCCCAGGTAGCCTGGGTAACATTCCGGCGCTGGAAATCGCACTGAATCTGAGCTGGAATAAACTTTTCGGTGAGATCCCTCGAGAGTTTTCTGCATTGAGCAAGCTCGGAATGTTAGACATATCCCACAACGAGCTCACCGGCAGTCTTCAGTACCTCGGGGATCTCCAAAATCTCGTAGTCCTCAACGTCTCATACAACAAATTCTCAGGTCGCGTTCCAGATAAGCCTTTCTTCTTGAAGCTCCCTCTCAGCGTGCTCGAGGGGAACCCGTCGCTCTGCTTCTCCGGCAACGAATGCTCCGGAGACGATTCCAGACGATCAGTTCGGCGGACCAAGGCGGCGCGTGTAGCCATGGTGGTCCTTCTGTGCATCGCGTGTGCGCTTTTCATCACGGCGCTATACGTCGTCGTTGCCGCAAGAAGACGTGGGTTCCGGGAAAACGATCTGGACATCGATGGAAGGAACAGTGACGTGGAGATGGGCCCACCTTGGGAAGTGACACTGTATCAGAAGCTCGACTTGTCAATATCTGACGTGGCAAGGTGTCTCACGGCTGGCAACGTCATCGGGCGAGGACGATCCGGCGTCGTTTACAGGGTAGATCTCCCGTCGGGATTAACCATCGCCGTGAAAAGGTACAGGTCATCGGAGAAACTCTCAGCGGCGGCATTCTCCTCGGAGATTGCCACCCTGGCAAGGATCCGGCACCGGAATATCGTGCGGCTGTTGGGTTGGGCGGCGAACCGGAAAACGAAGTTACTGTTGTTTGATTATTTACCAAACGGTAATTTAGATACGCTCTTACACGAGGGATGCACAGGATTAATCGAGTGGGACACACGGTTCAAGATAGCACTGGGCTTGGCTGAAGGCTTGGCTTACTTACACCATGACTGCGTGCCTGCTATCTTGCACCGGGACGTGAAAGCGCTTAACATTTTGTTGGGAGACAGATACGAATCGTGTTTGGCAGATTTTGGATTTGCTAGATTGGTGGAAGACGATCACAGTCCTTTCTCCGTTAACCCACAGTTCGCAGGTTCTTACGGCTACATTGCGCCGGAATATGGATGCATGGTGAAAATCACAGAGAAAAGCGACGTGTACAGCTTCGGGGTAGTGCTGGTAGAGATAATCACAGGAAAACGACCGGTGGACGCGTCGTTTGGGGAGGAGGGGCAGCACGTGATCGAGTGGGTGAGAGAGAAGCTAAAGAGGAAGAACAAGGACCCAATCGAAGTGATAGACTGTAAGCTTCAAGGGCTTCCAGACACGCAAATACAGGAGATGCTTCAGGCATTAGGGATCGCTCTCTTGTGCAGTAGTCATCGCGCAGAGGATCGGCCCACTATGAAGGATGTGGCGGCATTGTTGAGAGAGATTAGACACGAGCCTTCTTCCCTCAACGAGGTCCACAAGCCCACTACGACAAATAATAATGTCATTTCCCCGAAAACGACGTCTCGGCCTTCGTCGTATTCCTCGTCGTCCTCGTCGTTGTCGGTTCCGCCCACTCAGATGCTGCTGCTTCAATCCTCCTCGCATTCCTCCACGCTTGCTTATTCTGCTTCTTCGCTCGCCGGTTTCCACCCACCTGGAAGGGATCAATAA 3381 0.4886 MPVNPWTLFFCFSLSLLHHTFTAFAVNQQGEALLSWKRTLKGSLEVLSNWNPNDSTPCGWFGVDCNSNNEVVKLDLRYVDLVGTLPSNFTSLLSLNMLVITETNLTGSIPKEIGNLKELRYLDLSDNALTGEIPSELCFLTKLEQLRLNSNQLVGSIPSAIGKLTELVWLALYDNQLSGEIPRTIGNLKNLQVMRAGGNKNIEGSLPQEIGNCTKLVMLGLAETSISGFLPPTLGLLKKLDTLAIYTSLLSGQIPPELGDCTELQNIYLYENSLTGSIPSKLGNLRNLKNLLLWQNSLVGTIPPEIGNCYQLSVIDISMNSLTGSIPKSFGNLTLLEELQLSVNQVSGEIPAELGKCQQLTHVELDNNHITGTIPSDFGNLRNLTLLFLWHNKLEGTIPYSLSKCQNLEAVDLSQNGLTGSIPKGIFQLKNLNKLLLLSNNLSGNIPPEIGNCTSLIRFRASNNKITGNIPPQIGNLRNLNFLDLGSNRISGVIPEEISGNRNLTFLDLHSNLIGGNLPESLCQLVSLQFIDVSDNMIEGTLSTRLGSLGSLTKLILAKNRISGSIPSQLGSCAKLQLLDLSSNQLSGNIPGSLGNIPALEIALNLSWNKLFGEIPREFSALSKLGMLDISHNELTGSLQYLGDLQNLVVLNVSYNKFSGRVPDKPFFLKLPLSVLEGNPSLCFSGNECSGDDSRRSVRRTKAARVAMVVLLCIACALFITALYVVVAARRRGFRENDLDIDGRNSDVEMGPPWEVTLYQKLDLSISDVARCLTAGNVIGRGRSGVVYRVDLPSGLTIAVKRYRSSEKLSAAAFSSEIATLARIRHRNIVRLLGWAANRKTKLLLFDYLPNGNLDTLLHEGCTGLIEWDTRFKIALGLAEGLAYLHHDCVPAILHRDVKALNILLGDRYESCLADFGFARLVEDDHSPFSVNPQFAGSYGYIAPEYGCMVKITEKSDVYSFGVVLVEIITGKRPVDASFGEEGQHVIEWVREKLKRKNKDPIEVIDCKLQGLPDTQIQEMLQALGIALLCSSHRAEDRPTMKDVAALLREIRHEPSSLNEVHKPTTTNNNVISPKTTSRPSSYSSSSSSLSVPPTQMLLLQSSSHSSTLAYSASSLAGFHPPGRDQ 1126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1268 1126 Gene3D Ribonuclease Inhibitor 362 602 IPR032675 -
Bisa02g1268 1126 SUPERFAMILY Protein kinase-like (PK-like) 762 1048 IPR011009 -
Bisa02g1268 1126 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 200 423 - -
Bisa02g1268 1126 SMART LRR_sd22_2 164 190 - -
Bisa02g1268 1126 SMART LRR_sd22_2 261 287 - -
Bisa02g1268 1126 SMART LRR_sd22_2 622 647 - -
Bisa02g1268 1126 SMART LRR_sd22_2 477 500 - -
Bisa02g1268 1126 SMART LRR_sd22_2 116 148 - -
Bisa02g1268 1126 SMART LRR_sd22_2 525 544 - -
Bisa02g1268 1126 SMART LRR_sd22_2 501 520 - -
Bisa02g1268 1126 SMART LRR_sd22_2 381 410 - -
Bisa02g1268 1126 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 26 199 - -
Bisa02g1268 1126 Gene3D Ribonuclease Inhibitor 282 361 IPR032675 -
Bisa02g1268 1126 MobiDBLite consensus disorder prediction 1055 1099 - -
Bisa02g1268 1126 FunFam Putative LRR receptor-like serine/threonine-protein kinase 604 688 - -
Bisa02g1268 1126 Gene3D Phosphorylase Kinase; domain 1 758 848 - -
Bisa02g1268 1126 PANTHER UNNAMED PRODUCT 288 978 - -
Bisa02g1268 1126 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 849 1066 - -
Bisa02g1268 1126 FunFam Leucine-rich repeat receptor protein kinase EMS1 519 603 - -
Bisa02g1268 1126 Pfam Leucine rich repeat 71 129 IPR001611 GO:0005515
Bisa02g1268 1126 Pfam Leucine rich repeat 286 345 IPR001611 GO:0005515
Bisa02g1268 1126 Pfam Leucine rich repeat 551 611 IPR001611 GO:0005515
Bisa02g1268 1126 Pfam Leucine rich repeat 359 418 IPR001611 GO:0005515
Bisa02g1268 1126 Pfam Leucine rich repeat 478 538 IPR001611 GO:0005515
Bisa02g1268 1126 MobiDBLite consensus disorder prediction 1060 1099 - -
Bisa02g1268 1126 ProSitePatterns Protein kinases ATP-binding region signature. 779 801 IPR017441 GO:0005524
Bisa02g1268 1126 Gene3D Transferase(Phosphotransferase) domain 1 849 1072 - -
Bisa02g1268 1126 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 424 518 - -
Bisa02g1268 1126 SMART LRR_typ_2 381 405 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 622 645 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 333 357 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 477 501 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 429 453 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 502 525 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 549 573 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 285 309 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 116 138 IPR003591 -
Bisa02g1268 1126 SMART LRR_typ_2 140 164 IPR003591 -
Bisa02g1268 1126 SMART serkin_6 773 1048 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1268 1126 Pfam Leucine rich repeat N-terminal domain 27 66 IPR013210 -
Bisa02g1268 1126 SUPERFAMILY L domain-like 26 299 - -
Bisa02g1268 1126 FunFam Putative LRR receptor-like serine/threonine-protein kinase 758 848 - -
Bisa02g1268 1126 Pfam Protein kinase domain 776 1043 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1268 1126 PRINTS Leucine-rich repeat signature 576 589 - -
Bisa02g1268 1126 PRINTS Leucine-rich repeat signature 622 635 - -
Bisa02g1268 1126 Gene3D Ribonuclease Inhibitor 603 690 IPR032675 -
Bisa02g1268 1126 Gene3D Ribonuclease Inhibitor 180 281 IPR032675 -
Bisa02g1268 1126 Gene3D Ribonuclease Inhibitor 25 179 IPR032675 -
Bisa02g1268 1126 ProSiteProfiles Protein kinase domain profile. 773 1056 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1268 1126 SUPERFAMILY RNI-like 266 635 - -
Bisa02g1268 1126 ProSitePatterns Serine/Threonine protein kinases active-site signature. 893 905 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1268 Bisa-ChrBisa02 21570509 21574655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1268 24 1053 Receptor kinase-like Gene Family AT5G56040 55.245 0.0 1111
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Bisa02g1268 Pkinase 1.5e-39 CL0016