Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1259 ATGGCATCATCGAGCTCATACTCGTCCCCCTGCGCTGCCTGCAAATTCCTGAGGAGAAAATGCATGCCAGGCTGCATCTTCGCGCCTTACTTCCCTCCCGAGGAGCCCCAAAAGTTCGCCAACGTCCACAAGATCTTCGGAGCCAGCAACGTCACGAAGCTCCTCAACGAGCTCCTCCCTCACCAAAGAGAGGACGCCGTGAACTCTCTCGCTTATGAAGCAGAGGCTCGCGTGAGAGACCCCGTCTATGGCTGTGTAGGAGCCATCTCCTTCCTTCAGAGACAGGTCCAGAGGCTCCAGAAGGAGCTTGATGCCGCCAATGCCGATCTTCTTCGCTATGCCTGCAACGAAATCCCTCCTAGCTCTCTCTCTGTGGTGCCACATGGGATAGGGATGAGTGTGACCACTTCATCGCTTCATGTTCAGCAAAGTATGCCTCAGAGGCAAAGGTCGTCTTTGGAGTATGTTAATGGAAGGATTAATGAAGGAGGAGGTGGGTATTACAGGCAGTTCCCTTCGGCTTATAATTATTCTCTTCCTTACACTATTCCATGGGCCGATACAACCACTTCGGATGGCATCAATGAAGGAGGAGGAGGTGGAGGAGGTAATTTGTAA 618 0.5243 MASSSSYSSPCAACKFLRRKCMPGCIFAPYFPPEEPQKFANVHKIFGASNVTKLLNELLPHQREDAVNSLAYEAEARVRDPVYGCVGAISFLQRQVQRLQKELDAANADLLRYACNEIPPSSLSVVPHGIGMSVTTSSLHVQQSMPQRQRSSLEYVNGRINEGGGGYYRQFPSAYNYSLPYTIPWADTTTSDGINEGGGGGGGNL 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1259 205 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 8 141 - -
Bisa02g1259 205 Pfam Lateral organ boundaries (LOB) domain 10 107 IPR004883 -
Bisa02g1259 205 Coils Coil 89 116 - -
Bisa02g1259 205 ProSiteProfiles LOB domain profile. 9 110 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1259 Bisa-ChrBisa02 21059866 21060483 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1259 1 113 AS2 family AT5G63090 93.860 1.71e-74 221
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Bisa02g1259 LOB 3.6e-42 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2014 08 48460314 48460868 Bisa02g1259 02 21059866 21060483 CCT
Bisa08g2014 08 48460314 48460868 Bisa02g1259 02 21059866 21060483 ECH
Bisa02g1259 02 21059866 21060483 Bisa02g1259 02 21059866 21060483 ECH