Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1236 ATGAGATGGGATGAAATGGACCGGGTCGACCCATTCGAGGGTGCAACCTGTGACATGACATCTGAATCGAAGAAACAAGGAGGACAAAACAGAGAGAGAATAGAAACAAGAAGGAAGGCAGAAGCAAAACGACGAGGAAAGGATTTGTCCCATCAAGACCTAGACTATTCTGACTCCGAGTTTGTGGAGATTGATCCCAGCGGTCGATATGGTCGGTACAAGGAAGTTTTAGGGAAGGGGGCTTTCAAGAAAGTGTATCCTTTTTGTATGGTCTATTTGAATATGAGCAACTATATATGTGATATTCATTTATTTTTGAGAAAATTCTTCGTGGATGGTCTGTTTGTCATTAATAATGAAAGATATCGAGCCTTCGATGAGGTGGAAGGAATTGAAGTTGCTTGGAATCAGGTTAAAGTGACTGAACGATTGTGTAGTTCTGAAGATTTGGAACGTCTATACGCAGAAGTTCATTTGCTGAAGAGTTTGAAGCATAAAAATATAATTAAATTTTATAATTCATGGGTTGACACAGAGCATGACCACATCAACTTCATTACTGAAATGTTCACTTCAGGGACATTACGCCAATACCGGAAGAAACATAAGCATGTTGATTTAAAAGCTGTAAAGAAATGGTCTAGGCAGATTTTGGAGGGCCTTTTCTATCTTCATAGTCATGATCCACCAATTATTCATCGAGACCTAAAGTGTGATAACATCTTTGTCAACGGAAACCAAGGCGAGGTGAAAATTGGTGACTTAGGGTTGGCAGCCATTCTTCAGCAAGCGAATTCAGCTCACAGTGTCATAGGTACTCCGGAGTTTATGGCCCCAGAGCTCTATGAGGAGGATTACAATGAGCTTGTTGACATTTATGCTTTCGGCATGTGCTTGCTAGAACTGGTGACCGTTGAGTATCCATATATTGAATGTACAAATGCTGCTCAAATATACAAGAAAGTGACAACTGTAAGTGTTTCAAAGTCGTATGACTATTTCACTTGTCACGGAATCAAGCCCGCATCATTGGCAAAAGTAACAGATGCTGGAATCAAAGCATTTATAGAGAAGTGTATTGCAAATGTATCTGAACGATTGTCTGCAAAGGATCTCTTAATGGATTCCTTTCTTCATTTAGTCGAAAATAATGAAAATATAGATTGTTCTTTATGTCCCGAAATTCATCGTCCAGGACGTAGTTGCGGCCACCATACCATAGGTACAAGTGCTGTGGATAATCCTACGGAGACAAGTAGGGAATTTACAATGGAAGGTCAAAGGAGAGATGTTAATACAATATTTCTGAAACTGAGAATAGTAGACTTCTCAGGTCATATTCGCAATATCCACTTTCCTTTTGATATAGAGGCAGACACTGCAGTTGCTGTTGCTTGCGAAATGGTTGAGGAGCTGGAACTCACTGATCAAGATGTTACAACTATTGCTGAGATGATTGAGTCAGAAATTCGATACCACTCAACCGTTTGGAATGCCAGTAAAGTTCCTGTTGATAGTTCTGGCAAAGAGTTGGCAGTTTCAGGTAGCTGTGCCTCTGAAACTAGGGGTGAGGCCTCTCCTGTGGGTAATGTTTCTTCTGCTTTTACTGCTGGTCTTGCATTGGAAAGATTACGTTCAGGTCGTAAGTTTTGGTCAGACTCACCCAAGGCGGGTGCTAGAAACTCTTTATTAGGGCCTGGTCCTTCAAACTTGTCCCGCAACGTGGATGCCAGCACCGAGGAAGGTAACTTGACTGGAAATGGTGCTACCACAGTTCATCAGCAGGATGACAATGAGGATTTAAAGGTAACCGAGGGAGAATCTCCTCGGGAAAAAAAATCTAGAAAATCCGGGGATAGTGAATTTGAAAATGTCAACTTAATTACCACAGAACTGGAGAATTTGTTGATTAGACAGCGAGAGGAATTAGATAAACTAAAGAGGAAGCATGAATTAACTGTCTCAGGTTTTGTGGAGAAGCTTCCTCCTGAAGTGCGCCAGCAGGTTTTAGATATATGTCGTCTGGAGATACCTGACTGTGGGGATGGAGAGACACCGGAGGTTCCTTCCTCAGGTTAA 2079 0.4151 MRWDEMDRVDPFEGATCDMTSESKKQGGQNRERIETRRKAEAKRRGKDLSHQDLDYSDSEFVEIDPSGRYGRYKEVLGKGAFKKVYPFCMVYLNMSNYICDIHLFLRKFFVDGLFVINNERYRAFDEVEGIEVAWNQVKVTERLCSSEDLERLYAEVHLLKSLKHKNIIKFYNSWVDTEHDHINFITEMFTSGTLRQYRKKHKHVDLKAVKKWSRQILEGLFYLHSHDPPIIHRDLKCDNIFVNGNQGEVKIGDLGLAAILQQANSAHSVIGTPEFMAPELYEEDYNELVDIYAFGMCLLELVTVEYPYIECTNAAQIYKKVTTVSVSKSYDYFTCHGIKPASLAKVTDAGIKAFIEKCIANVSERLSAKDLLMDSFLHLVENNENIDCSLCPEIHRPGRSCGHHTIGTSAVDNPTETSREFTMEGQRRDVNTIFLKLRIVDFSGHIRNIHFPFDIEADTAVAVACEMVEELELTDQDVTTIAEMIESEIRYHSTVWNASKVPVDSSGKELAVSGSCASETRGEASPVGNVSSAFTAGLALERLRSGRKFWSDSPKAGARNSLLGPGPSNLSRNVDASTEEGNLTGNGATTVHQQDDNEDLKVTEGESPREKKSRKSGDSEFENVNLITTELENLLIRQREELDKLKRKHELTVSGFVEKLPPEVRQQVLDICRLEIPDCGDGETPEVPSSG 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1236 692 MobiDBLite consensus disorder prediction 551 621 - -
Bisa02g1236 692 Gene3D - 432 513 - -
Bisa02g1236 692 MobiDBLite consensus disorder prediction 565 594 - -
Bisa02g1236 692 ProSiteProfiles Protein kinase domain profile. 71 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1236 692 SMART serkin_6 71 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1236 692 FunFam probable serine/threonine-protein kinase WNK9 190 384 - -
Bisa02g1236 692 Gene3D Phosphorylase Kinase; domain 1 56 188 - -
Bisa02g1236 692 CDD STKc_WNK 69 378 - -
Bisa02g1236 692 MobiDBLite consensus disorder prediction 595 620 - -
Bisa02g1236 692 Coils Coil 629 649 - -
Bisa02g1236 692 SUPERFAMILY Protein kinase-like (PK-like) 75 397 IPR011009 -
Bisa02g1236 692 FunFam Probable serine/threonine-protein kinase WNK1 116 188 - -
Bisa02g1236 692 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 44 614 - -
Bisa02g1236 692 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Bisa02g1236 692 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 447 490 IPR024678 GO:0004674|GO:0005524
Bisa02g1236 692 Pfam Protein kinase domain 122 378 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1236 692 MobiDBLite consensus disorder prediction 25 50 - -
Bisa02g1236 692 MobiDBLite consensus disorder prediction 1 50 - -
Bisa02g1236 692 Gene3D Transferase(Phosphotransferase) domain 1 190 382 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1236 Bisa-ChrBisa02 20742501 20746308 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1236 183 679 MAP Kinase Kinase Kinase AT3G48260 52.200 1.72e-156 457
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Bisa02g1236 Pkinase 1e-46 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa02g1236 02 20742501 20746308 Bisa02g1236 02 20742501 20746308 ECH