Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1211 ATGGAGCTAGACGGAAGATTGTTGACTGTTAATAAGGCTGCTCCAAGAGGATCACAGCCTGAACGTCCACCCCGTGCCTTTGAACCTGCTTTCAGAATCTATGTTGGCAACTTGCCGTGGGATGTTGACAATACTCACCTCGAGCAAAGCTTCAGTGAATACGGTGAGGTTGTGAATGCTCGGGTAGTATATGACACAGAGACTGGTAGATCACGTGGTTTTGTCTTTGTCACAATGGCTAGTGAGACTGAAATGAATGATGTTATTGCTGAGCTTGACGGTCTGAGTTTGGGTGGGAGGACAATTAGAGTGAATGTTGCTGAGGAAAGGGCCAAACGGTCTTGA 345 0.4696 MELDGRLLTVNKAAPRGSQPERPPRAFEPAFRIYVGNLPWDVDNTHLEQSFSEYGEVVNARVVYDTETGRSRGFVFVTMASETEMNDVIAELDGLSLGGRTIRVNVAEERAKRS 114
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1211 114 SUPERFAMILY RNA-binding domain, RBD 23 112 IPR035979 GO:0003676
Bisa02g1211 114 Gene3D - 11 114 IPR012677 -
Bisa02g1211 114 PANTHER OS02G0815200 PROTEIN 2 111 - -
Bisa02g1211 114 CDD RRM2_NsCP33_like 32 107 - -
Bisa02g1211 114 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 33 103 IPR000504 GO:0003723
Bisa02g1211 114 SMART rrm1_1 32 105 IPR000504 GO:0003723
Bisa02g1211 114 FunFam 31 kDa ribonucleoprotein, chloroplastic 21 114 - -
Bisa02g1211 114 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 31 109 IPR000504 GO:0003723
Bisa02g1211 114 MobiDBLite consensus disorder prediction 1 25 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1211 Bisa-ChrBisa02 20276730 20278479 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1211 33 114 Eukaryotic Initiation Factors Gene Family AT1G71770 29.268 3.49e-08 48.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Bisa08g2074 08 49815395 49817867 Bisa02g1211 02 20276730 20278479 CCT
Bisa08g2074 08 49815395 49817867 Bisa02g1211 02 20276730 20278479 ECH
Bisa02g1211 02 20276730 20278479 Bisa02g1211 02 20276730 20278479 ECH