Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1191 ATGAATTTGTGGGCCTACTTTGACTCCAATGGACCAGAGTCCGTACCCATGGTGCAGTTGGATAAGACGTTGCAGTTCGGGTTCAGCAGCTCTGGCTTCGGAGCCAAACGCAGAGGTATTTTCTTGGCTGAAATCTCTGCCTCTGGCTCCCGAACGGCAATTGCGAATTTTAATCGCTCTTTGGCAGCCCGACTTGCTTCCTCTGACTCTTGTTCAAAATCTCAGCCTACATTCACCACAAGACAGCAACAGATCGGGTTCTGCCCTCGGAAACCACGGCCAGTGCAGCGTCCTGTTTGGCAGAGTGGCGAATACTACACGTTTCAGGAATTTGAAGCGAAGGCCAAGGCTTTTGAGAAGAACTACCTGAAAAAAGGTGCAAAGAAAGGTGGGCTTTCGCCTCTGGAAATAGAGACGATTTATTGGAAGGCGACAGTGGACAAACCCTTTTCAGTGGAGTATGCAAATGATATGCCTGGTTCTGCCTTTATTCCCCTTAATGGGAGAAAATGCGGAGAGGCAGGGGAGAGGGCGACTCTTGGCGAGACTGCATGGAACATGAGGGGTGTGTCAAGGGCAAATGACTCTTTGTTGAGGTTTATGAAGGAGGAGATTCCAGGTGTTACATCGCCAATGGTATATGTAGCTATGTTGTTCAGCTGGTTTGCTTGGCACGTAGAGGATCATGACTTGCATAGCTTGAATTACCTGCATATGGGGGCAAGCAAGACTTGGTATGGCGTACCAAGGGATGCGGCTGTTGCGTTTGAGGAGGTGGTCAGAGTTAATGGGTATGGAGGAGAAGTGAACCCTCTTGGATTTAATTGTGGGGAGGCAGCAAATATTGCAACACCTGAATGGTTGAGGGTTGCTAAAGATGCTGCTATAAGGAGGGCTTCAATAAACTATCCTCCCATGGTTTCACATTTCCAGTTACTTTACGACCTTGCCCTAGCTTTGTGTTCTAGAATTCCTGGAAGAATCAGTGCTAAACCGCGGAGTTCTCGACTTAAAGATAAGAGGAAGGGTGAGGGGGAAACTGTAATTAAAGAACTATTTATCCAGGATGTGCTACAAAACAATGATTTGCTTCATGCACTTGGGAAAGGATCTGCTATAGTACTTCTTCCTCGTAGCTCTTCAGACTTTTCTGTTTGCTCAAAATTGCGTGTTGGATCTCAACAACTAAAAGTGGACCCTGGGTTTTCCTTCAGTGCATGCAATTCTGATGGAATGAACTCCTCAATAGGTTTTGTTTCTGATGACCTGGTTTACAACAGGAATCATGGAATCAAGCAAGTGAAAGGTTTCTATTTGGTGAAAGAAAAGTTTGCTTCATTATGTGAAAGGAATAGGATTTCTTCATTAAGTGGAAATGATAACGCAAGCACATCAAGTTCAAAGACACTACAACGGGACACTGAAAGAGAAACAAATCAAGAAGATGGCTTGTCAGATCAGAGACTGTTTTCATGTGTCAAATGTGGAATGTTAAGCTTTTCCTGTGTTGCTATTGTACAGCCTAGAGAACCAACAGCTAGATACCTTATGTCAGCTGATTGTAGCTTCTTTAATGATTGGGTTGTTGGTTCTGGAGTAACTAGCAATAAATTTACTGTTTCCCATGAAGAAGCCACTACTTCTCTGCAGAACAGCTTTACAGGATACATGGGAAAAAATGCCCGAAAAGGTTTATATGATAGTCCTATCCAGTCTGTTGAATACCAGATGCAGCTTGCAGATCAAGATTACAAGGAGGCTTTAAATACTGAAGTACAAAAAGGAACTACAGCTCTTGGCTTATTGGCTTCAGCATATGGGAATTCTTCTGACTCTGAGGAAGATCAGGTTCAACCAGATAAGGGAGGTGGCAATGGTGAATCAAATGTGACAAACCATTCATCAGGAAGTAAATCCCAAAAGGAGATATCTAGTTTGCCTTCTGGGAATCATCAGACTTTTGACTATGCAGTTGGGTTGAATGATTATAATATTACTTCAGGGGTTGCATTTAAAAATATGAGGGCACTGCCTCATTCCGCCGTGAATTGTTCCCAAGATGTTCAGGATGCTGAAAGATTTATGTTCGGCAAGGCTAGAGTTCCCATTGATGATAAAAATATTCCATTTGTGCCACAATCTGATGAAGACTCATCCAGAATGCATGTTTTTTGTCTAGAGCATGCCACAGAAGTCGAGCAGCAACTTTGCCAAATGGGAGGAGCACACATACTGCTCCTCTGTCATCCAGACTATCCCAAGATAGAGGCTGAAGCAAAGATTGTGGCAGAAGACCTGGGGATTGATTACGTCTGGAAGAATATTGAATATAGGAATGCCACCAAAGAGGATGAGGAGAGGATCCAATCATCTTTGGATAGTGAGGAAGCTATTCCTGGGAATGGAGATTGGGCTGTAAAGCTGGGAATCAATCTATTTTATAGTGCCAATCTTAGCCGCTCTCCTCTGTATAGTAAGCAGATGCCTTACAATTCTGTTATATATAATGCATTTGGCTGTAACTCTCCAGCTAACTCACCCTCAGAGCCCAAGGTCTACCGGAGGAGGGCCAACAAGCAGAGAAGGGTAGTTGCTGGGAAATGGTGTGGTAAAGTTTGGATGTCCAACCAGGTTCATCCCCTTTTAGCAAAAAGAGAGTCTGAAGATGGTGAGGATGAAAAAAGATTGCATGGGTGGTCATTTCCTGATGAGAATATCGAAAGATCAGAAAGTACCCACAGAAACAATATTACTGGTAGAAAATCTGATAGGAAAAGGAAAATGACTGCAGGAGCCAGGAAGGCCGCTTTTGCTGAGAGAGATGTGGTTTCAGATAATCCATTTGAAGATAAACCCAACCTACAGCAAAGGAGAATTCTTGGAAGTAAGCAACCTAGATATATTGACAGAGATAATGCTCCTTTGGAAGGGGATTATTCTTCACAGCAGCATCATAGAAAACATAGAAGATTACAAACAAAATTCACTGAAAGTGATGTGGTTTCAGAATATTGGCCAGATGACATTTCTTCACAGCAGAATCATAGAAAACATAGAAGAGTACAAACAAAATTCACTGACAGTGATGTGGTTTCAGATGATTCGCCAGATGACAATTCTCAAATGCAGCGTAGGAGAAAAGATATTGTCAAGGAAGCTAAATTTTTTGACAATGATGTGGTTCCAGATGGTACAATAGACTATGATTGTGATTGGCAGCAGAGCAGCGAGTTAAGCAGCAAGGAAGTCAAGGATGCAGAGAGAGATACAATTTCAGAGGATTCATTGGGTGGTTGTTCTCTTCAGCCTCATAGGAAGACTCTTAAAAACGAGCAAGCCAAATACATTGCTGAAGAAGATGTAACTTCCAGTGATCACATCGAAAATCATTTTCAGAAACGGAAAAGGAAGATTCCTAAAAGCAGACAAACTAAGTGGCTTTCTGGGGAGGATTCATTGATGTCTGATGATCAACTGGAGCATCACACGCAGAAGCAGCAACAAAGGATTCCCAAAATCAGGCAAGCCAGAAACCTTGCTGAAGAGGATAATATATCTTATGACCAAGTGGAAGATTGTTCTCGGAAGTATCAGAGAAGGATTTCTAAAAGCAGGCAAGTCAAATGCGAAGATGTAATGTCTGATGACCATCTGGAGGATCACGATCAGAAGCAGCGAAGGAGTGCCCCAAGGAGCAGACGCAACAAACGCCTTGATAGAGAAGTTATACATGACTCAACTGAAAATAATTCTCATCTGCTGCATAGAACACCCAAGAGGAAGCAAGATAAATGCATGGATGAAGATGACATTAATTCAGGTGATAGGATGGATAGTGATTCTAATCAGCACGGGAGGAATCTTCGAAGTAATCAATCTAAATCAGAGAGACTTCAGCGAATGGAACAAGCTAAACCTTGCAGTGTGAAAAACCTGACATACCGGCCTGTTAAACACAGTGCTCGGCTTCTTGTTAAACCAAAGACTGCTCAGCAAATGAAGCAGCCGTCCCGTGTGCGAAATAATCAATTGGATAACTCCAGAGAGTTTAGTTTACATATTGAAGAGGAGGAAGAAGGCGGACCTAGCACACGCCTTAGGAAGAGAGTCCCTAAAGTTCAGGAGGAGTCTGAAGCAAAATCAAAAGAAAAGCAAACCAAAAGGAAAAAGGGGAAGCATGCCACGGGTGTAAAGGTTTCAGCTGGCCATGCCAAAGTGAAGGATGAGGAAGCAGATTACCAGTGTGACATTGAGGGTTGCAACATGAGTTTTGGGTCAAAACAGGAGCTTGTGGTGCATAAGAGAAACATATGTCCTGTAAAGGGGTGTGGAAAGAAGTTTTTCTCACACAAATATCTGGTGCAACACCGTCGCGTTCACATGGATGACCGCCCCCTGAGGTGCCCTTGGAAGGGCTGCAAGATGACTTTCAAGTGGGCATGGGCACGTACTGAACATATTCGAGTTCACACCGGTGCTCGTCCTTATGTTTGTGCTGAGCCTGGCTGTGGGCAAACATTTAGATTTGTGTCTGATTTCAGTCGTCATAAGCGAAAGACTGGCCATTCAGTGAAGAAGAATCGTTAA 4587 0.433 MNLWAYFDSNGPESVPMVQLDKTLQFGFSSSGFGAKRRGIFLAEISASGSRTAIANFNRSLAARLASSDSCSKSQPTFTTRQQQIGFCPRKPRPVQRPVWQSGEYYTFQEFEAKAKAFEKNYLKKGAKKGGLSPLEIETIYWKATVDKPFSVEYANDMPGSAFIPLNGRKCGEAGERATLGETAWNMRGVSRANDSLLRFMKEEIPGVTSPMVYVAMLFSWFAWHVEDHDLHSLNYLHMGASKTWYGVPRDAAVAFEEVVRVNGYGGEVNPLGFNCGEAANIATPEWLRVAKDAAIRRASINYPPMVSHFQLLYDLALALCSRIPGRISAKPRSSRLKDKRKGEGETVIKELFIQDVLQNNDLLHALGKGSAIVLLPRSSSDFSVCSKLRVGSQQLKVDPGFSFSACNSDGMNSSIGFVSDDLVYNRNHGIKQVKGFYLVKEKFASLCERNRISSLSGNDNASTSSSKTLQRDTERETNQEDGLSDQRLFSCVKCGMLSFSCVAIVQPREPTARYLMSADCSFFNDWVVGSGVTSNKFTVSHEEATTSLQNSFTGYMGKNARKGLYDSPIQSVEYQMQLADQDYKEALNTEVQKGTTALGLLASAYGNSSDSEEDQVQPDKGGGNGESNVTNHSSGSKSQKEISSLPSGNHQTFDYAVGLNDYNITSGVAFKNMRALPHSAVNCSQDVQDAERFMFGKARVPIDDKNIPFVPQSDEDSSRMHVFCLEHATEVEQQLCQMGGAHILLLCHPDYPKIEAEAKIVAEDLGIDYVWKNIEYRNATKEDEERIQSSLDSEEAIPGNGDWAVKLGINLFYSANLSRSPLYSKQMPYNSVIYNAFGCNSPANSPSEPKVYRRRANKQRRVVAGKWCGKVWMSNQVHPLLAKRESEDGEDEKRLHGWSFPDENIERSESTHRNNITGRKSDRKRKMTAGARKAAFAERDVVSDNPFEDKPNLQQRRILGSKQPRYIDRDNAPLEGDYSSQQHHRKHRRLQTKFTESDVVSEYWPDDISSQQNHRKHRRVQTKFTDSDVVSDDSPDDNSQMQRRRKDIVKEAKFFDNDVVPDGTIDYDCDWQQSSELSSKEVKDAERDTISEDSLGGCSLQPHRKTLKNEQAKYIAEEDVTSSDHIENHFQKRKRKIPKSRQTKWLSGEDSLMSDDQLEHHTQKQQQRIPKIRQARNLAEEDNISYDQVEDCSRKYQRRISKSRQVKCEDVMSDDHLEDHDQKQRRSAPRSRRNKRLDREVIHDSTENNSHLLHRTPKRKQDKCMDEDDINSGDRMDSDSNQHGRNLRSNQSKSERLQRMEQAKPCSVKNLTYRPVKHSARLLVKPKTAQQMKQPSRVRNNQLDNSREFSLHIEEEEEGGPSTRLRKRVPKVQEESEAKSKEKQTKRKKGKHATGVKVSAGHAKVKDEEADYQCDIEGCNMSFGSKQELVVHKRNICPVKGCGKKFFSHKYLVQHRRVHMDDRPLRCPWKGCKMTFKWAWARTEHIRVHTGARPYVCAEPGCGQTFRFVSDFSRHKRKTGHSVKKNR 1528
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1191 1528 FunFam Probable lysine-specific demethylase ELF6 1463 1492 - -
Bisa02g1191 1528 Pfam JmjC domain, hydroxylase 212 263 IPR003347 -
Bisa02g1191 1528 SMART cupin_9 179 299 IPR003347 -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1330 1348 - -
Bisa02g1191 1528 PANTHER LYSINE-SPECIFIC DEMETHYLASE 58 267 - -
Bisa02g1191 1528 Gene3D Classic Zinc Finger 1434 1520 - -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1199 1227 - -
Bisa02g1191 1528 SMART c2h2final6 1436 1460 IPR013087 -
Bisa02g1191 1528 SMART c2h2final6 1496 1522 IPR013087 -
Bisa02g1191 1528 SMART c2h2final6 1466 1490 IPR013087 -
Bisa02g1191 1528 SMART c2h2final6 1413 1435 IPR013087 -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 607 648 - -
Bisa02g1191 1528 ProSitePatterns Zinc finger C2H2 type domain signature. 1438 1460 IPR013087 -
Bisa02g1191 1528 Gene3D Cupin 41 270 - -
Bisa02g1191 1528 ProSiteProfiles JmjC domain profile. 182 435 IPR003347 -
Bisa02g1191 1528 SUPERFAMILY beta-beta-alpha zinc fingers 1436 1472 IPR036236 -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 884 947 - -
Bisa02g1191 1528 ProSiteProfiles Zinc finger C2H2 type domain profile. 1466 1495 IPR013087 -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1126 1152 - -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 884 992 - -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1234 1283 - -
Bisa02g1191 1528 ProSitePatterns Zinc finger C2H2 type domain signature. 1498 1522 IPR013087 -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1326 1402 - -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1077 1102 - -
Bisa02g1191 1528 ProSiteProfiles Zinc finger C2H2 type domain profile. 1436 1465 IPR013087 -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 456 482 - -
Bisa02g1191 1528 SUPERFAMILY Clavaminate synthase-like 194 312 - -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1349 1384 - -
Bisa02g1191 1528 FunFam Probable lysine-specific demethylase ELF6 1493 1522 - -
Bisa02g1191 1528 SUPERFAMILY beta-beta-alpha zinc fingers 1476 1520 IPR036236 -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1199 1310 - -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 622 648 - -
Bisa02g1191 1528 ProSiteProfiles Zinc finger C2H2 type domain profile. 1496 1527 IPR013087 -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1010 1045 - -
Bisa02g1191 1528 MobiDBLite consensus disorder prediction 1078 1092 - -
Bisa02g1191 1528 Gene3D Cupin 271 321 - -
Bisa02g1191 1528 ProSitePatterns Zinc finger C2H2 type domain signature. 1468 1490 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1191 Bisa-ChrBisa02 19985000 19996095 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1191 290 982 C2H2 Transcription Factor Family AT3G48430 45.851 1.65e-177 556
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Bisa02g1191 JmjC 1.2e-14 CL0029