Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1176 ATGAAGAGGATAACTACTGGCTTGGTTTGGTGTGTACATGCATATAGGACAGAGCTTGACATGGCATACATTCCAACAGATGGATGTGCCAACGGAATGAGGCTCGTTCAACTTCTAATTGCTTGCGCAGAAGCCGTGGCTTGTCGTGACAAATCACATGCTTCGAGCTTACTGTCTGAGCTCAGAGCCAATGCTTTGGTCTTCGGCTCTTCTTTCCAGAGAGTTGCTTCCTCAGTGAAAAAGAACTTGGAAAATCTGCATCATGATGACTTAAAAGTCCTTGAGGGAGAGGTTCTTGTTGTGAATAGTATTCTTCAGTTCCACTGTGTGGATGAAGAAAGTCGTAGGTCTTTAAACTCAGTGCTTCAGATCCACAAGCTGTCACCAAAGCTGTTGGTTATGGTGGAGCAGGACTCGAGCCACAATGGACCTTTCTTCTTTGGGAGATTCATGGAAGCACTGCAGTATTACTCCGCCATTTTTTACTCTCTGGATGCTATGCTGCCTAAGTATGACACACGGCTGGCAGAGATGAAGAAGAGATAA 546 0.4524 MKRITTGLVWCVHAYRTELDMAYIPTDGCANGMRLVQLLIACAEAVACRDKSHASSLLSELRANALVFGSSFQRVASSVKKNLENLHHDDLKVLEGEVLVVNSILQFHCVDEESRRSLNSVLQIHKLSPKLLVMVEQDSSHNGPFFFGRFMEALQYYSAIFYSLDAMLPKYDTRLAEMKKR 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1176 181 ProSiteProfiles GRAS family profile. 26 181 IPR005202 -
Bisa02g1176 181 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 84 166 IPR005202 -
Bisa02g1176 181 Pfam GRAS domain family 80 173 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1176 Bisa-ChrBisa02 19822536 19825369 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1176 96 170 GRAS Transcription Factor Family AT1G21450 44.304 1.57e-14 68.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa02g1176 GRAS 8.1e-21 CL0063