Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1175 ATGTATCCTCCTCTTTATAGTGCCTTCAAGGGTGAGAATGGTAATGAAACTTCAGTATTTGGCCTCAGACACCGAATATCAGTAAGGGGTTCCTCCGCTTATCCTCGTATGCCAATCTCTGAGAGCACTGCTGATTCCACTTTGATCATCCCCTCTTCTGACGATGAAACCAAGAGAGACATGAAAAAGATGAAGAGAAGCATAATCATCTCGGATCTTCTTGGAAATTCCAGCAGCAGCAACAGCAGTGTGAATAGCTTACCAAAGCTCCATTTCAGAGATCACATATGGACTTACACTCGGAGATACCTTGCGGCTGAAACTGTTGAAGAGGCAGCGAAAGACATGATGAGTTCTGAAGATGGAGGTGAAGGAGATGGATGTGCCGACGGAATGAGGCTTGTTCAACTTCTAATTGCTTGCGCAGAAGCCGTGGCTTGCCGTGACAGATCACATGCTTCAAACTTGCTGTCTGAGCTCAGAGCCAATGCTTTGGTCTTCGGCTTTTCTTTCCAAAGAGTCGCTTCCTGTTTCGCGCAAGGCCTAGCTGATCGTCTTGCTCTCGTTCAATTTCAACCCACTGGGGCTGTGGGATGCGTTTCACCTGTGATGAACATTATGGACGCAGCATCTGAAAAGATGGAAGAAGCTTATAAATTAGTGTACGAAATTTGCCCACACATTCAGTTTGGTCACTTTATAGGTAACTCCACAATATTGGAAGCCTTTGAAAGTCACGGTTCAGTTCACGTGGTGGACTTGGGGATGAGTCTTGGTCTTCACCACGGACACCAGTGGAGGGGGCTGATCCACAACCTTGCTAGCCGTCCCGGCCGACTGGTTCGCCGACTTCGACTCACTGGCGTTGGCCTTTGCATTAAGAGACTCAAGACCATAGGTGAAGAACTTCAGGTTTATGCAGAAAATTTAGGTGTTAATCTGGAATTCTCAGCAGTGCAAAAGAACTTGGAAAATCTGCATCCTGATGACATACAAGTTCGTGAGGGAGAGTTTCTTGTTGTGAATAGTATTCTTCAGTTGCATTGTGTGGTTAAAGAAAGTCGTGGGTCTTTAAACTCAGTGCTTCATATGATCCACAAGCTGTCACCAAAGCTGTTGGTTATGGTGGAGCAGGATTCGAGCCACAACGGACCTTTTTTCCTTGGGAGATTCATGGAAGCACTGCACTATTACTCTGCTATTTTTGACTCTCTGGATGCTATGTTGCCTAAGTATGACACGCGACGGGCAAAGATGGAGCAGTTTTACTTTGGAGAGGAGATAAAGAACATTGTGAGCTGTGAGGGAGCGGCAAGAGTGGAGAGGCACCAGAGGGTGAACCAGTGGGGCTGGAGGATGAGCAGGGCTGGGTTTCAGGCCGTGCCTATCAAGATAGTGGCTCAAGCCAGGCAGTGGCTTCAAGAGAAACAGGTCTGTGATGGCTACGCCGTTGTGGAAGAGAAAGGGTGCTTGGTGCTTGGCTGGAAATCAAAGCCCATTGTTGCAGCTTCTTGTTGGAAATGTTAG 1527 0.4728 MYPPLYSAFKGENGNETSVFGLRHRISVRGSSAYPRMPISESTADSTLIIPSSDDETKRDMKKMKRSIIISDLLGNSSSSNSSVNSLPKLHFRDHIWTYTRRYLAAETVEEAAKDMMSSEDGGEGDGCADGMRLVQLLIACAEAVACRDRSHASNLLSELRANALVFGFSFQRVASCFAQGLADRLALVQFQPTGAVGCVSPVMNIMDAASEKMEEAYKLVYEICPHIQFGHFIGNSTILEAFESHGSVHVVDLGMSLGLHHGHQWRGLIHNLASRPGRLVRRLRLTGVGLCIKRLKTIGEELQVYAENLGVNLEFSAVQKNLENLHPDDIQVREGEFLVVNSILQLHCVVKESRGSLNSVLHMIHKLSPKLLVMVEQDSSHNGPFFLGRFMEALHYYSAIFDSLDAMLPKYDTRRAKMEQFYFGEEIKNIVSCEGAARVERHQRVNQWGWRMSRAGFQAVPIKIVAQARQWLQEKQVCDGYAVVEEKGCLVLGWKSKPIVAASCWKC 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1175 508 Pfam GRAS domain family 134 507 IPR005202 -
Bisa02g1175 508 ProSiteProfiles GRAS family profile. 125 507 IPR005202 -
Bisa02g1175 508 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 101 502 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1175 Bisa-ChrBisa02 19820633 19822159 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1175 126 508 GRAS Transcription Factor Family AT1G66350 37.984 7.26e-79 254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Bisa02g1175 GRAS 4.4e-108 CL0063