Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1169 ATGGCTGACGCCGTCCACCCAAACAGTGGCTTTTGCCGTCAGACTAAGACTTTCCACAGTCTCCGTCCAAACATCCCTCTTCCTCATCCCTCAGAACCTCTTTCCATCATCGACTACGCTCTTTCTCTCATCCCCCCCACCGCTTCCGCCGCCACAGTTCTCATCGACGCCGACTCCGACCGCCACGTCTCTTATTCTCTCTTCCTTCAACAGATTAAAAACCTCGCTTCCTCTCTTTCTTCCATCTTCCCTCTTTCCAGAGGCCACGTGGCCTTCATTCTGTCCCCACCTTCTCTCCACATCCCTGTTCTGTATTACTCCCTCTTGTCTCTCGGAGTCACAATCTCACCCGCTAATCCAATCGGCTCCGAATCGGAGGTGGCTCACCAGGTTCAACTCGGCCAACCCGTTATCGCATTCGCTACCTCATCCACTGCTCACAAAATCCCCAAACTCCAATATGGCACCGTTTTCATCGATTCCCCGGAGTTTCTTTCCATGATCAATGGAACTGCCGGACGCGGTAGTATTACTACTAACGGAGTCGGCAGAGTTCAGATTAATCAATCCGACGTGGCGGCAATACTATTCTCGTCGGGAACCACCGGGAGAGTGAAGGGAGTGTTACTGACTCACAGGAACTTGATCGCACTAATTGGTGGATTTTATCACCTGAGGCACATGGATGATAAGGATGAAAATGAACCCGACCCGGTGTCGCTCTTCACGCTGCCGCTCTTCCACGTGTTTGGGTTTTTCATGTTGATTAGGGCCATATCGATGGGGGAGACGCTGGTCCTGATGCAGAGGTTCGATTTTGAAGGGATGCTGAAGGCGGTGGAGAGGTACAAGATTACGTATATGCCGGTTTCGCCGCCGCTTATTGTGGCGCTGACTAAGTCGGAGTTAGTGAACAAGTACGACCTCAGCTCGCTGAAGCTGCTGGGCTCCGGTGGCGCGCCGCTCGGCAAGGAGGTCGCCGAGAACTTCTATGCCCGATTCCCCGATGTGGAAATTGTGCAGGGCTATGGTCTGACTGAAAGTGGAGGAGGGGCAACGAGAATGATAGGGCCTGATGAAGCTAAACGCCATGGCTCTGTGGGTAGGCTAGCAGAGAACATGGAAGCCAAGATAGTGGATCCTGTGACTGGAGAGTCGTTACCTCCTGGCCAGAAAGGCGAGCTGTGGTTGCGAGGTCCAACAATTATGAACGGTTATGTAAGAAACGACGAGGCAACGGCTGAAACATTAACTCCAGAGGGATGGCTTAAGACCGGAGATCTCTGTTATTTTGACTCTGATGGTTTCCTCTACATTGTAGATAGGCTTAAGGAATTGATCAAATACAAAGCATATCAGGTTCCTCCAGCAGAACTGGAACATATTCTTCACACCAATCCTGAAATTGCTGATGCTGCTGTAGTTCCGTACCCTGATGAAGATGCAGGGCAAATTCCAATGGCTTTTGTGGTGAGAAAGCCTGGAAGCAATATCAGTGCAGCTAAGGTCATGGAATTTGTAGGAAAGCAGGTTGCGCCATACAAGAAGATACGGCGTGTGGCTTTCATTAACGCTATCCCAAAAAATCCATCTGGCAAAATTTTGAGAAGAGAATTAGTTGAGTCTGCTCTATCTAGTGGCTCATCCAAATTGTAA 1656 0.5018 MADAVHPNSGFCRQTKTFHSLRPNIPLPHPSEPLSIIDYALSLIPPTASAATVLIDADSDRHVSYSLFLQQIKNLASSLSSIFPLSRGHVAFILSPPSLHIPVLYYSLLSLGVTISPANPIGSESEVAHQVQLGQPVIAFATSSTAHKIPKLQYGTVFIDSPEFLSMINGTAGRGSITTNGVGRVQINQSDVAAILFSSGTTGRVKGVLLTHRNLIALIGGFYHLRHMDDKDENEPDPVSLFTLPLFHVFGFFMLIRAISMGETLVLMQRFDFEGMLKAVERYKITYMPVSPPLIVALTKSELVNKYDLSSLKLLGSGGAPLGKEVAENFYARFPDVEIVQGYGLTESGGGATRMIGPDEAKRHGSVGRLAENMEAKIVDPVTGESLPPGQKGELWLRGPTIMNGYVRNDEATAETLTPEGWLKTGDLCYFDSDGFLYIVDRLKELIKYKAYQVPPAELEHILHTNPEIADAAVVPYPDEDAGQIPMAFVVRKPGSNISAAKVMEFVGKQVAPYKKIRRVAFINAIPKNPSGKILRRELVESALSSGSSKL 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1169 551 FunFam 4-coumarate--CoA ligase 2 445 546 - -
Bisa02g1169 551 Gene3D - 445 545 IPR045851 -
Bisa02g1169 551 Pfam AMP-binding enzyme 51 449 IPR000873 -
Bisa02g1169 551 CDD 4CL 23 539 - -
Bisa02g1169 551 Pfam AMP-binding enzyme C-terminal domain 458 533 IPR025110 -
Bisa02g1169 551 SUPERFAMILY Acetyl-CoA synthetase-like 49 544 - -
Bisa02g1169 551 ProSitePatterns Putative AMP-binding domain signature. 195 206 IPR020845 -
Bisa02g1169 551 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 11 541 - -
Bisa02g1169 551 Gene3D - 18 444 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1169 Bisa-ChrBisa02 19592842 19595475 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1169 8 551 Monolignol Biosynthesis Gene Families AT5G63380 63.489 0.0 696