Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1160 ATGGTTTCAACGAGACGTAGTGGATCTCTCTCTGGCAACAATCCCAAAAGATCTTCCTCTTCGGAAGAGAAGCCTCCCTCACCAAAGCGTCAAAAGGTCGACAATGGTGGTGCGTCTGAGAAACCGATGCCGGCAGTGGAGAATTCTAAAGAAGTGTGTACTCCGGAGCCTAGAGAATGTGGGTCCGGCGATGCTCAGATCGCTGAAGCGGGTGCTAGCGATGGTCTGAGTTCTGGCAAGGGCGAGGTTACGCCATCTGTTGCTGTGGCGGAGCCGATCGCTGATGGGTCTTCGCCGACTTTGGTAGTTGACAAGCCGAGAGGTTCATTCTCTTCCTGGAGTATATGTCAGAAGCAAAATCCAACTTTTGAGAAATCGACACCCTGGTGCAGGCTCTTGTCACAGTCTGCGCAGCATTCAAATGTTGCCATTTGTGCACTGAACTTCACCATTGGTTCTAGTAGAAATTGCAACTTACCTTTGAAGGATCAGACAATAAGTGGGAATTTATGCAAGATCAAGCATACCCAGCGTGAGGGAAGTGCTGTAGCTGTGCTAGAAAGTACTGGTAGCAAAGGATCTGTGCTAGTAAATGGGATGCTTGTCAAGAAGAATACCAGTTGTGTGCTTAACTCAGGTGATGAGGTGGTCTTTGGTTTGCTGGGAAATCATTCTTATATTTTTCAGCAACTAAATAATGAGGTTGCAGTTAAGGGTGCAGAAGTTCAGAGTGGTGTTGGGAAATTTATGCAACTTGAAAGGAAAACTGGAGACCCATCAGCTGTGGCTGGGGCTTCTATCTTGGCTTCTCTTTCTAGCCTCCGACAGGATCTTTCAAGATGGAAATCTCCATCTCAGACCCCCAATAAATCTCTCCAGGGTACTGACATCTCTACTCATTCTGTTATCCATGATGGTACAGAAACTGAGCTTGGTGGCATGGAAGGCAACTCAGCTCCAACTGTAGGGAGTGATAAAGCGGTTGATATTGGAGCCAGCGACAAGAATTCTTCCATGGATTGTGATGCAGATGCTGGAACAGAGGCAGGCAATGTAAAACTCTCTGGGGTGAATGATTTCCTAAGGCCTTTTGTTAGGATCTTAGCTCAACCTAGTTGTAAACTGAAATTGAGCAAAAGTGTCTTAAAACAGGTATTAGAAGAAAGAAATGGAACAAGGGATATGCTGGCAACATCAAATTCGGGTATGTCTGTGCGCTGTGCGGTGTTTAAAGAAGATGTTCAAGCTGCAATATTGGATGGAAGAGAAATAGAAGTGTCATTTGACAACTTCCCATACTATTTAAGTGAGAACACAAAAAATGTGTTGGTTGCAGCTTGCTTTGTACACCTGAAGCATAAGGAACATGTGAAGTTCACTGTGGATCTTACAACCATAAACCCTCGTATCTTGCTTTCAGGACCTGCAGGGTCTGAAATATATCAAGAGATGTTGGCAAAAGCACTTGCCAAATATTTTGGAGCTAAGCTGCTCATATTTGACAGCCATTTGTTTTTGGGTGGTTTATCATCAAAGGAACCTGAGCTACTCAAAGCTGGATCTAAAGCTGAAAAATCCTGCAGCTGCACCAAGACAAATCTTATGGCCACAGACTTGGCTAGGAACATGGACCCATCAAGTAGTGAAATGGATACACCCTGCCCTTCAAATGCACCTTCTTCAAATGGCCTTGAATCTCAACCTAAGTCAGAGACTGATAACGTAGCCTCTATCTCTGGGACAGCTAGAAATTACTTGTTTAAACTAGGTGACAGGGTAAAATTTAGTTCTTTATCTTCTGGTGGCCTGTATCAGGCATCTTCTTCAAGGGGCCCGCCTAATGGAAGCCGGGGGAAGGTCATTTTACATTTTGATGGTAATCCTTTGTCAAAAGTTGGTGTAAGATTTGATAAACCCATTCCTGATGGAGTTAATCTAGGAGGTGCCTGTGAGGCAGGTCAAGGATTTTTTTGCAATGTTACCGACCTTCGATTAGAAAACAGTGGTGTGGAAGAATTGGACAAGTTACTTATTAATTCGTTATTTGAGGTTGTGTTTAGTGAGAGCAGAAGTGCTCCTTTCATTTTGTTCATGAAAGATGCTGAAAAATCTATTGTAGGAAATGGTGATCCATATTCATTTAAAAGTAAACTTGAAAAGCTTCCAGACAATGTGGTGGTTATAGGTTCACACACTCATGCTGACAGTCGGAAGGAGAAGTTGCATCCTGGGGGTTTACTTTTTACAAAGTTTGGAAGTAATCAGACTGCCCTTCTTGACTTGGCATTTCCGGATAGTTTTGGAAGATTGCATGACAGGGGTAAAGAAGTCCCAAAGCCAAATAAGACTTTAACGAAGCTTTTCCCTAATAAAGTAACAATTCACATGCCACAGGATGAGGCACTTCTAGCATCTTGGAAGCAGCAACTGGATCGAGATACTGAGACTCTCAAAATCAAGGGAAATTTACATAACTTGCGCACAGTTTTGGGCCGTTGTGGGATGGAATGTGAAGGAATAGACACCTCGTGCATAAAGGACCTGACACTTACAAATGAAAATGCAGAGAAGATAGTTGGTTGGGCTTTAAGCCACCATCTAATGAAGAATCCTGAAGCAGATCCTGATGCAAAGCTTGTATTATCTTGTGAGAGCATTCAGTATGGAATTGGGATCTTGCTGGCTATCCAGAATGAGTCCAAGAGCCTGAAGAAGTCTCTTAAGGATGTTGTTACAGAAAATGAGTTTGAAAAGAGGCTTTTGGGTGATGTTATTCCACCTAGTGACATTGGTGTTACTTTTGATGATATTGGAGCTCTTGAAAATGTCAAGGATACCTTAAAGGAGTTGGTTATGCTTCCTTTACAGAGGCCTGAGCTTTTTTGCAAGGGGCAGTTAACGAAGCCTTGCAAGGGTATCTTATTATTTGGTCCCCCTGGAACAGGTAAGACAATGCTTGCTAAGGCCGTTGCTACAGAAGCTGGTGCTAACTTTATCAACATTTCCATGTCAAGTATTACGTCTAAGTGGTTTGGTGAAGGAGAGAAATACGTGAAAGCTGTTTTTTCCCTTGCCAGTAAAATTGCCCCTAGTGTTATCTTTGTCGATGAAGTTGACAGCATGTTGGGCCGGAGGGAAAATCCAGGGGAGCATGAGGCCATGCGAAAGATGAAAAATGAATTTATGGTGAATTGGGATGGCTTACGTACGAAGGACACTGAGAGAATTCTTGTACTAGCAGCCACTAATAGGCCTTTTGACCTTGATGAGGCTGTCATCCGGAGGTTGCCACGGAGATTGATGGTAAATCTGCCAGATGCTCCAAATAGAGCAAAAATATTGAAAGTTATACTTGCAAAGGAGGACATGTCAGCTGGTGTTGATTTGGATGCAATTGCTAGTATGACTGAAGGGTATTCTGGAAGTGATCTTAAGAACTTGTGTGTAACTGCTGCACATTGTCCGATTAAAGAGATATTGGAAAAGGAGAAAAAGGAGCGTGCTGCCGCTCTAGCAGAAGGTAAACCTGCTCCACCATTGAGTGGAAGTGCTGATATTCGATCGTTAAACATGGATGACTTCAAACAAGCTCATGAACGGGTATGCGCAAGTGTATCCTCTGAATCAGTCAACATGACTGAGCTTTTACAGTGGAATGAACTATACGGGGAAGGCGGTTCAAGAAGAAAGAAAGCACTAAGCTATTTCATGTGA 3714 0.4327 MVSTRRSGSLSGNNPKRSSSSEEKPPSPKRQKVDNGGASEKPMPAVENSKEVCTPEPRECGSGDAQIAEAGASDGLSSGKGEVTPSVAVAEPIADGSSPTLVVDKPRGSFSSWSICQKQNPTFEKSTPWCRLLSQSAQHSNVAICALNFTIGSSRNCNLPLKDQTISGNLCKIKHTQREGSAVAVLESTGSKGSVLVNGMLVKKNTSCVLNSGDEVVFGLLGNHSYIFQQLNNEVAVKGAEVQSGVGKFMQLERKTGDPSAVAGASILASLSSLRQDLSRWKSPSQTPNKSLQGTDISTHSVIHDGTETELGGMEGNSAPTVGSDKAVDIGASDKNSSMDCDADAGTEAGNVKLSGVNDFLRPFVRILAQPSCKLKLSKSVLKQVLEERNGTRDMLATSNSGMSVRCAVFKEDVQAAILDGREIEVSFDNFPYYLSENTKNVLVAACFVHLKHKEHVKFTVDLTTINPRILLSGPAGSEIYQEMLAKALAKYFGAKLLIFDSHLFLGGLSSKEPELLKAGSKAEKSCSCTKTNLMATDLARNMDPSSSEMDTPCPSNAPSSNGLESQPKSETDNVASISGTARNYLFKLGDRVKFSSLSSGGLYQASSSRGPPNGSRGKVILHFDGNPLSKVGVRFDKPIPDGVNLGGACEAGQGFFCNVTDLRLENSGVEELDKLLINSLFEVVFSESRSAPFILFMKDAEKSIVGNGDPYSFKSKLEKLPDNVVVIGSHTHADSRKEKLHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEVPKPNKTLTKLFPNKVTIHMPQDEALLASWKQQLDRDTETLKIKGNLHNLRTVLGRCGMECEGIDTSCIKDLTLTNENAEKIVGWALSHHLMKNPEADPDAKLVLSCESIQYGIGILLAIQNESKSLKKSLKDVVTENEFEKRLLGDVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATEAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERILVLAATNRPFDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDMSAGVDLDAIASMTEGYSGSDLKNLCVTAAHCPIKEILEKEKKERAAALAEGKPAPPLSGSADIRSLNMDDFKQAHERVCASVSSESVNMTELLQWNELYGEGGSRRKKALSYFM 1237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1160 1237 Gene3D - 128 237 - -
Bisa02g1160 1237 Pfam ATPase family associated with various cellular activities (AAA) 973 1102 IPR003959 GO:0005524|GO:0016887
Bisa02g1160 1237 SUPERFAMILY SMAD/FHA domain 114 226 IPR008984 GO:0005515
Bisa02g1160 1237 MobiDBLite consensus disorder prediction 542 574 - -
Bisa02g1160 1237 FunFam p-loop nucleoside triphosphate hydrolase superfamily protein 931 1107 - -
Bisa02g1160 1237 Pfam AAA+ lid domain 1127 1161 IPR041569 -
Bisa02g1160 1237 Gene3D - 1105 1199 - -
Bisa02g1160 1237 MobiDBLite consensus disorder prediction 22 36 - -
Bisa02g1160 1237 MobiDBLite consensus disorder prediction 1 21 - -
Bisa02g1160 1237 ProSitePatterns AAA-protein family signature. 1076 1095 IPR003960 GO:0005524|GO:0016887
Bisa02g1160 1237 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 410 1236 - -
Bisa02g1160 1237 CDD RecA-like_ATAD1 936 1102 - -
Bisa02g1160 1237 MobiDBLite consensus disorder prediction 1 63 - -
Bisa02g1160 1237 Pfam FHA domain 150 219 IPR000253 GO:0005515
Bisa02g1160 1237 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 932 1212 IPR027417 -
Bisa02g1160 1237 ProSiteProfiles Forkhead-associated (FHA) domain profile. 149 202 IPR000253 GO:0005515
Bisa02g1160 1237 SMART AAA_5 969 1106 IPR003593 GO:0016887
Bisa02g1160 1237 Gene3D - 931 1212 IPR027417 -
Bisa02g1160 1237 CDD FHA 131 229 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1160 Bisa-ChrBisa02 19358819 19373153 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1160 932 1184 Calmodulin-binding Proteins AT3G56690 39.615 1.29e-41 164