Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1144 ATGGATAACAACCAGCAAGCCCAATCCTCCTCATACCCACCTCAACCCTCTGCTCCTCCTCCTTTCCACCACCTTCTCCAACAGCAGCAGCAGCAGCTCCAGATGTTCTGGTCCTACCAGCGCCAGGAAATCGAGCATGTCAACGATTTCAAGAACCACCAGCTCCCTCTCGCCCGCATCAAGAAGATCATGAAGGCCGACGAGGATGTTCGCATGATCTCCGCCGAGGCGCCCATTTTGTTCGCCAAGGCCTGCGAGCTTTTCATCCTCGAGCTCACTATACGATCTTGGCTCCACGCCGAGGAGAACAAGAGGAGGACCCTCCAGAAGAACGACATAGCCGCTGCCATCACCAGGACTGACATCTTCGATTTCTTGGTCGATATTGTGCCCAGAGATGAGATCAAGGACGAGGCTGGCCTTGGTGGCATGGTGGGGACCACAGCCAGCGGTGTCCCTTATTATTATCCACCTATGGGCCAACCTGCTGGCCCTCCCGGCGGTATGATCATTGGGCGGCCGGCGGTGGATCCCACCGGAGTGTATGTGCAGCCACCCTCGCAGGCATGGCAGTCGGTGTGGCAGACTGCAGCTGACGATGGATCGTACGGGAGCGGCGGGAATACTGGACAGGGCAATCTTGATGGTCAGAGTTGA 657 0.5723 MDNNQQAQSSSYPPQPSAPPPFHHLLQQQQQQLQMFWSYQRQEIEHVNDFKNHQLPLARIKKIMKADEDVRMISAEAPILFAKACELFILELTIRSWLHAEENKRRTLQKNDIAAAITRTDIFDFLVDIVPRDEIKDEAGLGGMVGTTASGVPYYYPPMGQPAGPPGGMIIGRPAVDPTGVYVQPPSQAWQSVWQTAADDGSYGSGGNTGQGNLDGQS 218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1144 218 Pfam Core histone H2A/H2B/H3/H4 29 117 IPR007125 GO:0003677
Bisa02g1144 218 SUPERFAMILY Histone-fold 8 126 IPR009072 GO:0046982
Bisa02g1144 218 FunFam Nuclear transcription factor Y subunit gamma 23 132 - -
Bisa02g1144 218 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 27 148 - -
Bisa02g1144 218 Gene3D Histone, subunit A 22 132 IPR009072 GO:0046982
Bisa02g1144 218 MobiDBLite consensus disorder prediction 1 22 - -
Bisa02g1144 218 MobiDBLite consensus disorder prediction 195 218 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1144 Bisa-ChrBisa02 19140245 19143896 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1144 22 217 CCAAT-HAP5 Transcription Factor Family AT3G48590 88.614 4.62e-110 313
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Bisa02g1144 CBFD_NFYB_HMF 2.2e-17 CL0012