Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1133 ATGAAAGGTGCGTCTTGGGATTTGACGGAACTGGAGGAAGCGGGATTACCCAACATAGAAACAGTGGGTACTATTAACGATGGGTCAAGCAGATTCGGAGTCAGATCAGTGAACAGAAGTAACGAAGGGGAGTTTTGTGTTGATTTGAAGCTTGGTCAGGTTGGGAATTCTGGCAGTGGAGTCTCCAAAACGGCGTCGTCGCCTTCTGCATCAGGATCGTCCAAGAGAGCTCGAGCAGTCAACAACACGACCCAAACGGTGTCGTGTCTTGTGGATGGGTGCAATTCAGATCTTAGTAATTGTAGGGACTACCATAGGCGTCACAAGGTGTGCGAACTCCATTCCAAAACCCCAGTCGTCACTATTGCTGGCCACAAGCAAAGGTTCTGCCAACAGTGTAGCAGGTTTCATTCGCTGGAGGAATTTGACGAAGGGAAGAGAAGTTGCAGAAAGCGATTAGATGGGCACAACCGACGAAGAAGAAAGCCACAAGCAGTAGGTCTCACGCGATCAGCAAATTTTTTGTCGAACTACCAAGGGAGGCAGGTATTGCCGTTGTCATCGAGCTCGAGTTCACATGTATATCCCTCGAGAGGCGTGGGGTGGGACGCTAGGTTCCACCATCAAGTGCAGAAGCAGGAGCTATATCTTGATCTTGGGTCATCTTCTTCGGCCACAAGCAGCTTCGTGAGTAACGGGGATAAGCAGGAAATGGCGCCATTCTTAGTCACCTGCAACCTCCAAAACCCTGGTGGATCTGTGTGCCAGAGCAGTACAGCTACAGGTATGATGATGAGGAGGACGACGACGACGGAGGAGTCTCCTCCTTGTGCTCTCTCTCTTCTGTCATCCCCAGTAATACAGAGCCACAGTAGTAGTACGCCCTTGTCTCTGGTGCAGCCCTTAGGCCTCAACCTCCATCACCACTCCTTCCAACACTCTCTCCACACTTCTTCTCTCTCTTCCATCTATGACATCGACTCTCATGCATCCCAGGCCAATCAACCTTCTCCCTCACTTCCCTTTCATTGGGAATAG 1038 0.5048 MKGASWDLTELEEAGLPNIETVGTINDGSSRFGVRSVNRSNEGEFCVDLKLGQVGNSGSGVSKTASSPSASGSSKRARAVNNTTQTVSCLVDGCNSDLSNCRDYHRRHKVCELHSKTPVVTIAGHKQRFCQQCSRFHSLEEFDEGKRSCRKRLDGHNRRRRKPQAVGLTRSANFLSNYQGRQVLPLSSSSSSHVYPSRGVGWDARFHHQVQKQELYLDLGSSSSATSSFVSNGDKQEMAPFLVTCNLQNPGGSVCQSSTATGMMMRRTTTTEESPPCALSLLSSPVIQSHSSSTPLSLVQPLGLNLHHHSFQHSLHTSSLSSIYDIDSHASQANQPSPSLPFHWE 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1133 345 FunFam Squamosa promoter-binding-like protein 14 80 150 - -
Bisa02g1133 345 SUPERFAMILY SBT domain 87 165 IPR036893 GO:0003677|GO:0005634
Bisa02g1133 345 Gene3D - 79 150 IPR036893 GO:0003677|GO:0005634
Bisa02g1133 345 ProSiteProfiles Zinc finger SBP-type profile. 86 163 IPR004333 GO:0003677
Bisa02g1133 345 MobiDBLite consensus disorder prediction 57 79 - -
Bisa02g1133 345 Pfam SBP domain 89 162 IPR004333 GO:0003677
Bisa02g1133 345 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 50 330 IPR044817 GO:0003677
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1133 Bisa-ChrBisa02 18991926 18995101 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1133 27 200 SBP-box Gene Family AT5G50670 54.450 3.20e-59 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Bisa02g1133 SBP 6.5e-31 No_clan