Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1100 ATGCATTTTGCAAAACTTGATGATTCGCCTATGTTTCGGCAACAGATGCAATGCTTGGAAGAAGATGTAGACTCATTACGGATGAGAAGCCTTAAGTTCTACAAAGGATGTCGGAAGTACACGGAAGGGCTAGGAGAGGGATATGACGGGAACATTGCTTTTGCAACTGCCCTTGAATCTTTTGGGGGAGGGCATGGTGATCCTTTCTTTGTTGCTTTGGGAGGACCTGTTATGACCAAATTCACCATCGCTTTGAGAGAAATTGGTACATATAAAGAAGTTCTTCGGTCACAGGTGGAGCACATGCTTAATGATCGGTTGCTACACATTCTCAATGTTGACATTCCTGAAGTTAAGGAAGCTCGGAAGCGTTTTGATAAAGCTTCCCTTGTATATGAACAGGCACGTGATAAGTTTCTGTCATTGAGAAAAAGCACTAGGATTGACATTGCCAATGTTGTAGAAGAGGAATGGCACAATGCTAGAGACTCATTTGAGGAAGCCCGCTTCAATCTGGTTAGTGCTCTAAATAATGTTGAGTCCAGGAAGAGATTTGAATTTTTGGAGGCTGTCACCGGAGTTATGGATGCTCATCTTCGATACTTTCAACAGGGATATCAGCTACTGCATCAGATGGAACCTTTCATTACTGAGGTTTTGGCTTATACACAGCAGTCAAGAGAAAATCACAATATGGAACAGATTTCTCTTAATGACAAAATACAAGAGTACAGAAGACAAATTCACCAAGAAAGTAGATTGTCATTGAATGGCTCCCATGGATCTCCTGTAGACTGTGTACAGCCTTTTTCCAGGGTATCAAATGAAGTGGCAGATGCAGTAATGGAATCTGCTGCAAATGGAAAGGTTCAAATTATTAGACAAGGATTTCTATCAAAACGGTCCTCCAATCTGAGGGCTGACTGGAAGAGAAGGTATTTTGTTCTTGACAGTCGAGGAATGCTGTTCTATTATCGGAAACCATGGAACTGGTCACATAGTGGCAATCTACCATCCGCACAGAAGAATAATGCCACTGAAAATGGTACCGGGATTCTGAGCCGGTGGCTTTCTTCTCATTATCATGGGGGTGTCCATGATGAAAGATCTGTAGCAAGGCATGCTGTGAACCTGCTTACATCAACAATTAAGGCTGATGCTGATCAGTCAGATTTAAGATTCTGCTTCAGGATTATTTCACCAGTAAAGAACTATACATTGCAGGCAGAAAATGCAGTGGACCAGATGGATTGGATTGAAAAGATAACAGGAGTAATTGCTTCTTTGTTGAGTGTTCAGTCAGCAGAAATGCCTCTCACAGCTGACCCTGAGAGTGGTAACTGTAACTCTGCCAGCACAACTGATACATTAGAAAGTTTTCTGGATGATGATCAGGCGGTGACTAAGGAGTGTGCATCCAGGAACTTCGCCTCTAATAATCACTTACGTGAATGTAAAAGTTTACAGTGGCATAAACTGAGTCCAAAATGTGAAAAACCAATTGAGGTTCTTAGAAGGGTAAGTGGGAATGACAGATGTGCTGACTGTGGTAAATCTGAACCAGACTGGGCATCTTTGAACCTCGGCATTCTTATATGTATAGAGTGTTCTGGCATTCACCGGAATCTGGGTGTACATATATCAAAAGTGAGATCACTGACACTTGATGTGAAAGTCTGGGACCCTTATGTCTTGTCCATGTTTCAGTCTCTGGGCAATTGCTTTTCAAACTCAGTTTGGGAAGAGAAGTTGCATTCAACAAGTAATATGCAAGCTCATGACAAACCTGTTGGAAACACAATATTTCGTGCCAGAAAACCAGAACATGATGATTCTATTTCTTTAAAAGAGAGGTTCATTCACGCAAAGTATTCTGAGAAAGTCTTTGTTCACCAGATAAAGGATAACCACCATCTCCTTTCAGTGGCACAACAGTTGTGGGAAAGCGTCTATGCCAATGACAAGAAAGCAGTGTACCAGCATATTGTGAAGTCCGATTTGGATGTGAATGCTATCAGTGGGCAGGAATACTATGGTGACAATTTTGACATGCCTTGTTCGAGTAATTCAAAATCTTCCTCTAAAAGGGAAAATCAGCCAGTAGAGGACATACTAGATGGTTCTAGTGTGCTTCACCTGGCATGCCTAACTGCTGACGTTGCTATGGTGGAGCTGCTCTTACAATATGGTGCAGATGTAAATGCTTCCGATTCAAGAGGTCGCACACCACTGCATTACTGTATTATCAAAGGGAATACTGCAGCGGCAAAATTGCTTCTTACAAGGGGGGCTAATCGACATGCCGTAGATGAAGGAGGCAATACCCCTCTTAAGCTTGCATCAGAATCCGCTTCTATTGGCAATGATGTCCTCGCCCTCTTGACTAGCTAG 2391 0.4237 MHFAKLDDSPMFRQQMQCLEEDVDSLRMRSLKFYKGCRKYTEGLGEGYDGNIAFATALESFGGGHGDPFFVALGGPVMTKFTIALREIGTYKEVLRSQVEHMLNDRLLHILNVDIPEVKEARKRFDKASLVYEQARDKFLSLRKSTRIDIANVVEEEWHNARDSFEEARFNLVSALNNVESRKRFEFLEAVTGVMDAHLRYFQQGYQLLHQMEPFITEVLAYTQQSRENHNMEQISLNDKIQEYRRQIHQESRLSLNGSHGSPVDCVQPFSRVSNEVADAVMESAANGKVQIIRQGFLSKRSSNLRADWKRRYFVLDSRGMLFYYRKPWNWSHSGNLPSAQKNNATENGTGILSRWLSSHYHGGVHDERSVARHAVNLLTSTIKADADQSDLRFCFRIISPVKNYTLQAENAVDQMDWIEKITGVIASLLSVQSAEMPLTADPESGNCNSASTTDTLESFLDDDQAVTKECASRNFASNNHLRECKSLQWHKLSPKCEKPIEVLRRVSGNDRCADCGKSEPDWASLNLGILICIECSGIHRNLGVHISKVRSLTLDVKVWDPYVLSMFQSLGNCFSNSVWEEKLHSTSNMQAHDKPVGNTIFRARKPEHDDSISLKERFIHAKYSEKVFVHQIKDNHHLLSVAQQLWESVYANDKKAVYQHIVKSDLDVNAISGQEYYGDNFDMPCSSNSKSSSKRENQPVEDILDGSSVLHLACLTADVAMVELLLQYGADVNASDSRGRTPLHYCIIKGNTAAAKLLLTRGANRHAVDEGGNTPLKLASESASIGNDVLALLTS 796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1100 796 ProSiteProfiles Ankyrin repeat region circular profile. 739 771 - -
Bisa02g1100 796 SUPERFAMILY ArfGap/RecO-like zinc finger 498 632 IPR037278 -
Bisa02g1100 796 ProSiteProfiles Ankyrin repeat profile. 706 738 IPR002110 GO:0005515
Bisa02g1100 796 CDD BAR_SFC_plant 15 215 IPR035670 -
Bisa02g1100 796 Pfam Ankyrin repeats (many copies) 708 760 IPR002110 GO:0005515
Bisa02g1100 796 FunFam ADP-ribosylation factor GTPase-activating protein AGD1 480 638 - -
Bisa02g1100 796 Gene3D Arf GTPase activating protein 478 638 IPR038508 -
Bisa02g1100 796 ProSiteProfiles Ankyrin repeat profile. 739 771 IPR002110 GO:0005515
Bisa02g1100 796 SUPERFAMILY Ankyrin repeat 705 783 IPR036770 -
Bisa02g1100 796 SMART PH_update 292 429 IPR001849 -
Bisa02g1100 796 Pfam PH domain 293 426 IPR001849 -
Bisa02g1100 796 ProSiteProfiles Ankyrin repeat region circular profile. 706 737 - -
Bisa02g1100 796 ProSiteProfiles ARF GTPase-activating proteins domain profile. 498 637 IPR001164 GO:0005096
Bisa02g1100 796 Gene3D - 644 796 IPR036770 -
Bisa02g1100 796 Gene3D Arfaptin homology (AH) domain/BAR domain 4 250 IPR027267 -
Bisa02g1100 796 Pfam Putative GTPase activating protein for Arf 500 631 IPR001164 GO:0005096
Bisa02g1100 796 PRINTS HIV Rev interacting protein signature 510 529 IPR001164 GO:0005096
Bisa02g1100 796 PRINTS HIV Rev interacting protein signature 529 546 IPR001164 GO:0005096
Bisa02g1100 796 PRINTS HIV Rev interacting protein signature 552 573 IPR001164 GO:0005096
Bisa02g1100 796 SMART ANK_2a 706 735 IPR002110 GO:0005515
Bisa02g1100 796 SMART ANK_2a 739 768 IPR002110 GO:0005515
Bisa02g1100 796 SMART 5bar 2 218 IPR004148 GO:0005515|GO:0005737
Bisa02g1100 796 Gene3D - 284 438 IPR011993 -
Bisa02g1100 796 SMART arf_gap_3 498 637 IPR001164 GO:0005096
Bisa02g1100 796 SUPERFAMILY PH domain-like 292 449 - -
Bisa02g1100 796 CDD PH_ACAP 294 431 - -
Bisa02g1100 796 Coils Coil 227 247 - -
Bisa02g1100 796 PANTHER CENTAURIN/ARF 3 795 IPR045258 GO:0005096
Bisa02g1100 796 SUPERFAMILY BAR/IMD domain-like 6 314 IPR027267 -
Bisa02g1100 796 CDD ArfGap 501 624 - -
Bisa02g1100 796 Coils Coil 118 138 - -
Bisa02g1100 796 ProSiteProfiles PH domain profile. 291 427 IPR001849 -
Bisa02g1100 796 Pfam BAR domain of APPL family 6 231 IPR004148 GO:0005515|GO:0005737
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1100 Bisa-ChrBisa02 18399826 18459633 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1100 510 630 C2H2 Transcription Factor Family AT4G05330 42.623 3.89e-20 90.9