Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1099 ATGATGTCTGCACTGAACGACCCTGCTTCGGCTTCGTGGGCTTTGGACTTCAATGCCGATATGAGCTGCGTTGGCGAGAAAGAGAACCCTGGTTTTGTTGAGAACAGAGGCGATATGGGTTCTCTGTGTGGTTTTAAACCCATGCTAAACGACGATGAGTGGTACATGGCGAATATTAGTATGCAAAATCAATCTGGCATCTCTGTATCGCCGAATTTCACAGACCCAGATAGTCTATTGATGCACGCAGTCGATTCGTCCTCTTCCTGCTCTCCGACTTCCCCTGTGTTCAACAACAACAATCTCGACCCATCTAAGATTCAGTACTTTCTCCCTCCCAAGCCCACCATTTCTTCTCTTCTCAATGTCATCCCTAGCAACCCTTTAGAGCATAATTTCGACATGTTTCTTGAACCTCAACCTTCGAACTCCCCTTCCCTTCTGGGAAGCTTCACTGGATTAAACTCAAATCCCCAGTTAAGTCTTCCCAATTTGAGCTCAAATCCCAATTTATCAACGACGCGTTCTGGAAATTTCGAAGCAAACTCGTTGTTTCTCAATAGGTCCAAGATACTGAAACCCCTTGACTCTTCACCTCCATTGGGAGCACAGCCGACGCTTTTTCAGAAGAGGGTGGCTCTTCGGAAAAATTTGGCATTGGCAGAGAAAAATGGTAACGGGAATTGGGAAATGAGAGAAGGGAATGATAAGAAGAGGAAGATGTGTAACGGGGAGGGAGCGGAAGACGGCAGTTTTGATGGGTCGGTATTTAATTACGATATGGATGAACTGACTGAGAATAATGCGACGGAAGAAATTTCGAAGAATGGTGGAAACAGCTCGAATGCGAACAGTACTGTCACTGATGGTGGGGATCAGAAGGGGAAGAAAAAGGGAATGCCTGCGAAGAATTTGATGGCTGAACGACGTCGTCGGAAGAAGCTCAACGATAGACTATACACGCTGAGATCCGTTGTTCCAAAAATTAGCAAGATGGACAGGGCTTCTATCCTTGGGGATGCAATTGAGTATCTGAAGGAACTAAAGCAAAGGATCAATGAGCTGCAGAACGAACTAGATTCAACACCTACTGGCTCTTCACTCACACCTGCCTCAAGCTTCCAACCTTTAACACCTACTCCAACTGCACTACACAGCCGTATCAAGGAAGAGCTTTGCCCCTCCTCCTTACCAAGCCCTAATGCCCAACATGCTACGGTGGAGGTTCGATTACGAGAAGGAAGAGGCGTAAATATCCACCTGTTCTGTGCTCGCAAACCTGGCCTCTTGCTCTCAACCATGAGGGCTTTGGATGGTCTTGGGTTAGACATACAGCAAGCTGTTATTAGCTGCTTCAACGGATTTGCTTTGGACATCTTTCAAGCTGAGCAATGCAAGGAAGTCCAGGACGTCCATCCCGAGCAGATCAAAGCAATACTCTTGGATTCAGTTGGATTTTGCGGCATGCTCTAG 1473 0.4671 MMSALNDPASASWALDFNADMSCVGEKENPGFVENRGDMGSLCGFKPMLNDDEWYMANISMQNQSGISVSPNFTDPDSLLMHAVDSSSSCSPTSPVFNNNNLDPSKIQYFLPPKPTISSLLNVIPSNPLEHNFDMFLEPQPSNSPSLLGSFTGLNSNPQLSLPNLSSNPNLSTTRSGNFEANSLFLNRSKILKPLDSSPPLGAQPTLFQKRVALRKNLALAEKNGNGNWEMREGNDKKRKMCNGEGAEDGSFDGSVFNYDMDELTENNATEEISKNGGNSSNANSTVTDGGDQKGKKKGMPAKNLMAERRRRKKLNDRLYTLRSVVPKISKMDRASILGDAIEYLKELKQRINELQNELDSTPTGSSLTPASSFQPLTPTPTALHSRIKEELCPSSLPSPNAQHATVEVRLREGRGVNIHLFCARKPGLLLSTMRALDGLGLDIQQAVISCFNGFALDIFQAEQCKEVQDVHPEQIKAILLDSVGFCGML 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1099 490 CDD bHLH_AtAMS_like 302 367 - -
Bisa02g1099 490 Coils Coil 338 358 - -
Bisa02g1099 490 PANTHER TRANSCRIPTION FACTOR SCREAM2-RELATED 172 485 - -
Bisa02g1099 490 Gene3D - 292 363 IPR036638 GO:0046983
Bisa02g1099 490 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 299 348 IPR011598 GO:0046983
Bisa02g1099 490 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 302 366 IPR036638 GO:0046983
Bisa02g1099 490 SMART finulus 305 354 IPR011598 GO:0046983
Bisa02g1099 490 Pfam Helix-loop-helix DNA-binding domain 306 348 IPR011598 GO:0046983
Bisa02g1099 490 CDD ACT_UUR-ACR-like 419 479 - -
Bisa02g1099 490 MobiDBLite consensus disorder prediction 271 302 - -
Bisa02g1099 490 MobiDBLite consensus disorder prediction 359 381 - -
Bisa02g1099 490 MobiDBLite consensus disorder prediction 271 290 - -
Bisa02g1099 490 FunFam BHLH transcription factor 295 363 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1099 Bisa-ChrBisa02 18391509 18394587 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1099 45 463 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G26744 49.782 9.86e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g1099 HLH 3.5e-10 No_clan