Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1092 ATGGCAGCTTTCTCATTCCAGTACCATCCTTTTCTTGTTGACTCTCCATTTTTCTCCAATGCTCCCATAAGTATGAACACACCTGCCCCTCCTTCTCAGTCTCAGCTTCACCCCTCTCAACCTCTTCATGAGACATATTTTAATGTCACAAATCAGGAAACTAGCTGTGTTGATCAAAGCTCCAAGTTTACCGTCACTGATAGTGAGCCTTCCTCTGTGACCAAAAACCAGAGTCCTGAGACCTCCATGGTGGTGGATAAGCTCGAACCTGGTGAGCAGGTCACTCAGAAGGTCATTCCTATGGAGAAGAAGAGGAGAAACAGAAACGGGTCTTCATTGGGTTCCCCTCAATCTAAGGACGCAACAAGAAGAACAAACAAGAAACAAAAGAAGAGCAATAACGGTGAGGGAAAAGAAGGGGATAAGCAGAAAGCAGAGAAGAAGAATCAGAAAAAGAGTCCTGAAGAGCCTCCAACAGGCTATATCCACGTAAGAGCAAGAAGGGGTCAAGCAACTGATAGCCACAGCCTAGCTGAAAGAGTAAGAAGAGAGAAAATAAGTGAGAGGATGAAGATGTTGCAGCGACTTGTGCCAGGCTGTGATAAGGTAACTGGAAAGGCCCTCATGTTGGATGAAATAATCAATTATGTTCAGTCCCTACAAAATCAAGTTGAGTTCTTGTCCACGAAGCTTGCTTCTTTGAATCCCTTCTTCTATGACTTCACAATGGACCTAGATGGCCTCATGGTTAGACCAGAGAAATCAAATTGCATAGCATCACCACTACCATCTGTGCCACAATGCAGCCCCAACCAGGTCACAACTTTTGCTGATACAACCGCCATTACTACCGCCGCTGGCGGCTTTCCCTCTGCTAATAACTATCTTTTGGACAACTCAGCTGCATTTTTTCTTCAAGGACAAAGGTCAAATGTCTTCTCTGAGGATGCTGGTAGTCAATTCTGGGAGGTGGAAGAGCAACGACAAAAGTTTCTTCATCCATATGGGATCGCCAACAGCTTATGTTCTTTTCATTAA 1038 0.4461 MAAFSFQYHPFLVDSPFFSNAPISMNTPAPPSQSQLHPSQPLHETYFNVTNQETSCVDQSSKFTVTDSEPSSVTKNQSPETSMVVDKLEPGEQVTQKVIPMEKKRRNRNGSSLGSPQSKDATRRTNKKQKKSNNGEGKEGDKQKAEKKNQKKSPEEPPTGYIHVRARRGQATDSHSLAERVRREKISERMKMLQRLVPGCDKVTGKALMLDEIINYVQSLQNQVEFLSTKLASLNPFFYDFTMDLDGLMVRPEKSNCIASPLPSVPQCSPNQVTTFADTTAITTAAGGFPSANNYLLDNSAAFFLQGQRSNVFSEDAGSQFWEVEEQRQKFLHPYGIANSLCSFH 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1092 345 Gene3D - 167 237 IPR036638 GO:0046983
Bisa02g1092 345 MobiDBLite consensus disorder prediction 60 83 - -
Bisa02g1092 345 MobiDBLite consensus disorder prediction 121 154 - -
Bisa02g1092 345 PANTHER STEROL REGULATORY ELEMENT-BINDING PROTEIN 50 267 IPR024097 GO:0006355
Bisa02g1092 345 MobiDBLite consensus disorder prediction 60 178 - -
Bisa02g1092 345 CDD bHLH_AtBPE_like 160 245 - -
Bisa02g1092 345 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 220 IPR011598 GO:0046983
Bisa02g1092 345 SMART finulus 176 226 IPR011598 GO:0046983
Bisa02g1092 345 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 168 237 IPR036638 GO:0046983
Bisa02g1092 345 FunFam Basic helix-loop-helix transcription factor 167 239 - -
Bisa02g1092 345 Pfam Helix-loop-helix DNA-binding domain 174 221 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1092 Bisa-ChrBisa02 18293259 18294979 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1092 124 302 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G50915 59.777 2.31e-60 193
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g1092 HLH 2.1e-06 No_clan