Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1090 ATGAAAACGCTCGACACCTCCGATCCCCTCGCTCTCTCCGATGACCTTCTTTCCCCTCTTCTCGACCAAATCCCCACCGTTCTTCACTTCAAGGGAAAATGGTCTCTTATCACTTCAAAACTTCACCATCTTCACACTTACCTCTCCGATTTCTCCTCCGACTTCCCCAACTCTTCCTCCTCTAACCCCCTCTGTCTCCACCTTCTCCGCTCCATCTCCCTCACCCTCCACGACGCCGTTTCGCTCGCCAAGGATTGCCAGTCTCCCACTTTATCCAACGGTAAGCTCAACACTCAGAGCCGCATCGACTCCCTCCTCGCCAGCCTCGATCGTCATCTCGCAGATTTTGTCGTACTCTTCAGAAGCGGCGTACTCCAGGACGACGCCGTTTCGGCTGCCTCGAAGTTGTCTAAGAGGGACGTTGTTCGATCCGAGTCCAGAAATTTGATCACTCGTTTGCAAATTGGGGCCGCCGAGTCTAGGATTTCGGCTATGGACTCCTTGCTGGGTTTGCTCCAAGAGAGTGATAAGTATGTGATGATAGCTGTGGCGCAGGGTGTGGTTCCCGTGCTCGTTCGCTTACTGGATTCCAGCTCTTCGGAAATGAAGGAGAAGATTGTTTCTGCGATATCCAGAGTTTCCATGGTGGATAGCAGCAAGCATGTTTTAATCGCTGAGGGTTTGTTGCTCTTGAATCATTTACTTCGAGTTCTCGATCATGGGAGTGGATTCGCTAAAGAGAAAGCTTGTATTGCTCTCCAAGCTCTAACGTTCTCAAAAGAGAACGCGAGGGCAATCGGGTGTAGAGGTGGAGTTTCTTCGTTATTGGACATTTGCCAAGTCGGCACGCCTGGTTCACAAGCTTCCGCAGCAGGAGTTTTGAGAAATCTCGCAAACTTCGCTGAAATTAGAGAAAATTTCGTGGAGGAGAATGCGGTCGGTGTTCTGTTAGGGCTCGCCTCTTCGGGAACTGCATTGGCCCAAGAAAATGCAATTGGCTGTTTGTCTAATTTAATCTCTGATGACGACAATTTGAAAGCAATTGTTGTTAAGGAAGGAGGGATTGAGTGTTTGAAGGATTTCTGGGACTCGGCTCCCACAGTTCAGAGTCTTGCAGTCGCAGTTGAATTGTTGAGGTACTTGGCTTCAAGTCCACGGATTGCTCAAGTTCTTGTTTCTTACGGGTTTATAGGGAGACTTGAGGGGGTGTTAAATTGTGGAGTACTAGGAATGAGAATTGCAGCTGCTAGAGCTGTTCATGCTGTGGGGTTCAGCAACACAAAGACGAAGAAAGAGATGGGTGAATGTGGATGCATCACCCCATTGATCAAGATGTTGGATGGTAAGGCCGTAGAAGAGAAAGAAGCAGCATCTATGGCTTTGTCAGTACTCATGTCATATGCAGGCAATAGAAGGATTTTCCGAAAGGATGAGAGGGGTATAGTGAGTGCGGTTCAGCTGTTGGATCCTTCGATACAGAATTTGGATAAGAAATACCCAGTTTCAATTCTGGCTTCACTTGTGCATTCTAAGTCTTGTAGGAAACAGATGGTAGCAGCCGGGGCCTGTGTACATACACGAAAACTTGTAGAGATGGATGTTGAGGGCTCCAAAAAACTCTTGGAAAGCCTTGGTCCTGGCAAGATATGGGGAGTATTTGCCAGACCCTAG 1671 0.4835 MKTLDTSDPLALSDDLLSPLLDQIPTVLHFKGKWSLITSKLHHLHTYLSDFSSDFPNSSSSNPLCLHLLRSISLTLHDAVSLAKDCQSPTLSNGKLNTQSRIDSLLASLDRHLADFVVLFRSGVLQDDAVSAASKLSKRDVVRSESRNLITRLQIGAAESRISAMDSLLGLLQESDKYVMIAVAQGVVPVLVRLLDSSSSEMKEKIVSAISRVSMVDSSKHVLIAEGLLLLNHLLRVLDHGSGFAKEKACIALQALTFSKENARAIGCRGGVSSLLDICQVGTPGSQASAAGVLRNLANFAEIRENFVEENAVGVLLGLASSGTALAQENAIGCLSNLISDDDNLKAIVVKEGGIECLKDFWDSAPTVQSLAVAVELLRYLASSPRIAQVLVSYGFIGRLEGVLNCGVLGMRIAAARAVHAVGFSNTKTKKEMGECGCITPLIKMLDGKAVEEKEAASMALSVLMSYAGNRRIFRKDERGIVSAVQLLDPSIQNLDKKYPVSILASLVHSKSCRKQMVAAGACVHTRKLVEMDVEGSKKLLESLGPGKIWGVFARP 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1090 556 PANTHER ARM REPEAT SUPERFAMILY PROTEIN 5 554 - -
Bisa02g1090 556 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 186 228 IPR000225 GO:0005515
Bisa02g1090 556 Pfam Armadillo/beta-catenin-like repeat 179 211 IPR000225 GO:0005515
Bisa02g1090 556 Gene3D - 137 364 IPR011989 -
Bisa02g1090 556 SUPERFAMILY ARM repeat 148 494 IPR016024 -
Bisa02g1090 556 SMART arm_5 426 466 IPR000225 GO:0005515
Bisa02g1090 556 SMART arm_5 259 299 IPR000225 GO:0005515
Bisa02g1090 556 SMART arm_5 300 340 IPR000225 GO:0005515
Bisa02g1090 556 SMART arm_5 175 215 IPR000225 GO:0005515
Bisa02g1090 556 SMART arm_5 341 383 IPR000225 GO:0005515
Bisa02g1090 556 Gene3D - 365 543 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1090 Bisa-ChrBisa02 18232456 18234126 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1090 130 415 U-box Gene Family AT2G23140 27.083 7.10e-16 79.0