Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1088 ATGGGTTGCGTGCTCGGAGCGCCTAGGGATGATGGAGGCCGCAGGAAGGATTCCAGAGCGCAGCGCCGTCGCCAACAAAACTCTGTTACGGAAGGAGGCAATGTTGTTAGGGTTGGGAACGAAGGGACGGCGAGGGTGAGACAAAGGACTCGACAGCACGCCGGCGATGTTGCCGGGAGTCTTCCGGCGCCGGAGCGACTGAAACCTAGTCTTGATCCGTGCGCTAAAACCGAACAGGGTTGGCCGTCTTGGTTGATGGCTGTGGCTGGCGATGCCATCCGGGATTGGACTCCTCGGCGCGCCAACACGTTCGAGAAGCTCTCGAAGATTGGACAGGGAACGTATAGCAATGTATATAAAGCGAGAGACCTTCTTACTGGAAAGATAGTGGCTCTAAAGAAAGTTAGGTTTGATAATCTTGAGCCGGAGAGTGTCAAATTCATGGCAAGAGAGATTCTTGTTTTGAGGCGGCTTGATCACCCAAATGTCGTGAAACTTGAGGGCTTGGTTACTTCAAGAATGTCATGCAGTCTTTACTTAGTATTCGAGTATATGGAACACGATCTTACTGGGCTTGCAGCTATTCAAGGTGTTAAGTTTACTGAGCCTCAGGTCAAGTGCTATATGAAGCAATTACTCTCTGGCCTTGAGCATTGCCACAGCAATGGTGTCCTGCACCGTGATATCAAGGGTTCCAATCTGCTTATTGATGATGAAGGAATCCTTAAAATTGCAGATTTCGGACTGGCGACGTTCTTTGATCCTGATAAAAAGCAGCCAATGACAAGTAGAGTTATCACCCTTTGGTATCGCCCTCCTGAGCTTCTTCTTGGGGCTACATACTATGGTGTTGGTATTGACCTCTGGAGTGCTGGCTGCATCCTGGGAGAGTTGCTTGCTGGGAAGCCAATCATGCCTGGCCGAACAGAGGTTGAACAACTCCACAAAATTTTTAAATTATGTGGCTCTCCATCTGATGATTACTGGAAGAGATATAGATTACCAAATGCTACACTCTTTAAGCCACAACAACCATATAAACGTTGCATTTTAGAAACCTTCAAGGACTTCCCTCCTTCTTCCTTACCTCTAATGGAAACTCTTCTTGCAATAGATCCTGATGATCGTGGCACTGCCTTTTCTGCTCTTGATAGTGAATTTTTTAGCACTGAGCCCTATGCTTGTGAACCATCAAGTTTACCAAAGTATCCTCCCAGCAGAGAATTGGATGTAAAACTGAGAGATGAAGAAGCTAGAAGGCAAAAAGCTCTAAATGGGAAAGCTAATGCAGTTGATGGTGCCAGAAGAGTCAGAGTACGTGAGCGTGGTCGGGCCATTCCGGCCCCAGAAGCCAATGCAGAGATCCAAACAAACTTAGATAGGTGGAGAGTTGTGACCCATGCAAACGCAAAAAGCAAGAGCGAGAAATTTCCACCTCCTCATCAAGATGGAGCTGTTGGGTATCCATTGGATGCATCTCAGAAGGGACCTGTGTCATTTGGTGCTACTGATGCTTCCTTTAGCTCTGCAATATTTAATTCGAAACCTTCAGAATCTCTTAAAAGTCATGCTGCTTCTGGACCTGACAGAGGGAGGAAAGCTAAGAAAGCAGAATCCCAAGTGGCTTCATCATGGAAATTTATGCGCGCATTTAAGCCTTCAATTCATTAA 1671 0.4686 MGCVLGAPRDDGGRRKDSRAQRRRQQNSVTEGGNVVRVGNEGTARVRQRTRQHAGDVAGSLPAPERLKPSLDPCAKTEQGWPSWLMAVAGDAIRDWTPRRANTFEKLSKIGQGTYSNVYKARDLLTGKIVALKKVRFDNLEPESVKFMAREILVLRRLDHPNVVKLEGLVTSRMSCSLYLVFEYMEHDLTGLAAIQGVKFTEPQVKCYMKQLLSGLEHCHSNGVLHRDIKGSNLLIDDEGILKIADFGLATFFDPDKKQPMTSRVITLWYRPPELLLGATYYGVGIDLWSAGCILGELLAGKPIMPGRTEVEQLHKIFKLCGSPSDDYWKRYRLPNATLFKPQQPYKRCILETFKDFPPSSLPLMETLLAIDPDDRGTAFSALDSEFFSTEPYACEPSSLPKYPPSRELDVKLRDEEARRQKALNGKANAVDGARRVRVRERGRAIPAPEANAEIQTNLDRWRVVTHANAKSKSEKFPPPHQDGAVGYPLDASQKGPVSFGATDASFSSAIFNSKPSESLKSHAASGPDRGRKAKKAESQVASSWKFMRAFKPSIH 556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1088 556 ProSitePatterns Protein kinases ATP-binding region signature. 110 133 IPR017441 GO:0005524
Bisa02g1088 556 PANTHER CELL DIVISION PROTEIN KINASE 102 392 - -
Bisa02g1088 556 ProSitePatterns Serine/Threonine protein kinases active-site signature. 224 236 IPR008271 GO:0004672|GO:0006468
Bisa02g1088 556 MobiDBLite consensus disorder prediction 512 542 - -
Bisa02g1088 556 MobiDBLite consensus disorder prediction 1 68 - -
Bisa02g1088 556 Gene3D Transferase(Phosphotransferase) domain 1 187 428 - -
Bisa02g1088 556 CDD STKc_CDK9_like 104 388 - -
Bisa02g1088 556 Gene3D Phosphorylase Kinase; domain 1 90 186 - -
Bisa02g1088 556 Pfam Protein kinase domain 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1088 556 MobiDBLite consensus disorder prediction 470 490 - -
Bisa02g1088 556 FunFam probable serine/threonine-protein kinase At1g54610 187 428 - -
Bisa02g1088 556 ProSiteProfiles Protein kinase domain profile. 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1088 556 SUPERFAMILY Protein kinase-like (PK-like) 97 393 IPR011009 -
Bisa02g1088 556 MobiDBLite consensus disorder prediction 9 24 - -
Bisa02g1088 556 MobiDBLite consensus disorder prediction 525 539 - -
Bisa02g1088 556 FunFam probable serine/threonine-protein kinase At1g54610 91 186 - -
Bisa02g1088 556 SMART serkin_6 104 388 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1088 Bisa-ChrBisa02 18217220 18220996 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1088 96 422 Core Cell Cycle Gene Families AT5G10270 52.286 1.46e-117 355
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CRK7-CDK9 Bisa02g1088 Pkinase 1.5e-66 CL0016