Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1083 ATGGCAAAGTGGAATTTGGTGAAGAATGGAAAGAGCAGATTACCTTTACCTCCAGGGTTCAGGTTTCAGCCAACAGATGAAGAGCTTGTGTTTCAGTACTTAAAATGCAAGATCTTGTCCTACCCATTGCCTACTTCTTTCATTCCTCATGTCAATGTCTGCAACTACGATCCTTGGGATTTGCCAGGTAATTGGGAAGAGGAAGAGAGGTGCTTCTTCAACAAGAAGGAAGCAAAATACAGAAATGGGAGTCGCATGAACCGAACCACCAAGTCTGGGTATTGGAAGGCCACTGGTTCTGACAAGAAAATCTGTTCTCCTTCAAATCACAATATTAATATTAACCCTAATGTGTTTGGTGGCATCAGAAAGACCTTGGTGTTTTACCAAGGCAAAGCTCCAAATGGGCTTAGAACCAACTGGGTCATGCATGAATATCGCCTTGTCGTTGCAGAAGCCACCACTCTCAACTCCACTCATCTGGTGTCCAGTATTCCAATACGTCGTCGTCTTGTTCGAGCTCGAGTGGCATCGCAGAGCCATAAACAAGACTGTACAGGTCAAAACAATAACCTTATATTCCCCATTGCACCAATTTCATTCGCAAAAGCCTTCAAATTCTCAAGTCTTGCACCCATTAGCGTATTTTCTTCTGCAACGCTATTCCTTGTGTTGCAAGCAAGCTCATCATTTTGGGCTGCAATGGGGTCTAGTGGTTCGAAGGTGAAACAAGCAGGAGAGGCAGAGCTTCGAAAGATTCGTCCTTTTCTTTATCGTCGATACGAAGAATTGAAGGACCGCAAGCAAAGAATAGTAAACGCCATTAAAAAAGAAAGCACCCACTCCAGGAAGAACCTGCTGCGGAAGGAGCAAGACGAAGATGCCACCTCTGACTCTTTCCTTGAAACTGAAACAATGCAGATTCCTACGGTCACTCCTCCGACGAAGACTGAACCAGCCAAAGTGGTCCCACTGCCACCCTCAGATTGTAAAATTGAGGAGGCTATTCAAATTCTAGAAAAGGAGAGAAACAATGATGATGGGGATGATGATGATGATGATGATGAAGAATATTATGATTATGAGGAGGAGGACGAGGAGGAAAAGGAGAAGCAGGTTGAATTTCGTAGACATATAATTCCCAGCTCACCGAGCTTCAGGATTTATTGCATTCCTGAAGTGAACCTGAAGGAAGAAAGTGAAGACGGTAAGATCCAAGAAAGAGATACAGACCAGAAAGCGATGAGTGATCATGAAAGAGTGGAAGGCCCAAGACCTTCGTCTGGTCACCTAAAGACACAAAGTTTTGAGAGTTTCCAAAGTGCTGCACCATCGGAGAACTCAAAAGCCTGGAGCGAGAGTGTCAGAACAGATTCAAGCACAAAGAGAAGAGGACATACAAGGAAGAAACTGAGGGCTGTGAAGAATCTACTCCACGTCAAATCATTATACACGAGCTGTACTTGTGTGGTTAATCACAGAACCCAAAATGTTGTTGCAAAAGCAACGAATTGA 1515 0.4396 MAKWNLVKNGKSRLPLPPGFRFQPTDEELVFQYLKCKILSYPLPTSFIPHVNVCNYDPWDLPGNWEEEERCFFNKKEAKYRNGSRMNRTTKSGYWKATGSDKKICSPSNHNININPNVFGGIRKTLVFYQGKAPNGLRTNWVMHEYRLVVAEATTLNSTHLVSSIPIRRRLVRARVASQSHKQDCTGQNNNLIFPIAPISFAKAFKFSSLAPISVFSSATLFLVLQASSSFWAAMGSSGSKVKQAGEAELRKIRPFLYRRYEELKDRKQRIVNAIKKESTHSRKNLLRKEQDEDATSDSFLETETMQIPTVTPPTKTEPAKVVPLPPSDCKIEEAIQILEKERNNDDGDDDDDDDEEYYDYEEEDEEEKEKQVEFRRHIIPSSPSFRIYCIPEVNLKEESEDGKIQERDTDQKAMSDHERVEGPRPSSGHLKTQSFESFQSAAPSENSKAWSESVRTDSSTKRRGHTRKKLRAVKNLLHVKSLYTSCTCVVNHRTQNVVAKATN 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1083 504 Coils Coil 258 278 - -
Bisa02g1083 504 ProSiteProfiles NAC domain profile. 16 168 IPR003441 GO:0003677|GO:0006355
Bisa02g1083 504 MobiDBLite consensus disorder prediction 428 455 - -
Bisa02g1083 504 MobiDBLite consensus disorder prediction 282 296 - -
Bisa02g1083 504 MobiDBLite consensus disorder prediction 300 314 - -
Bisa02g1083 504 MobiDBLite consensus disorder prediction 282 326 - -
Bisa02g1083 504 MobiDBLite consensus disorder prediction 345 369 - -
Bisa02g1083 504 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 16 294 - -
Bisa02g1083 504 SUPERFAMILY NAC domain 12 153 IPR036093 GO:0003677|GO:0006355
Bisa02g1083 504 MobiDBLite consensus disorder prediction 399 468 - -
Bisa02g1083 504 Gene3D NAC domain 25 183 IPR036093 GO:0003677|GO:0006355
Bisa02g1083 504 MobiDBLite consensus disorder prediction 399 426 - -
Bisa02g1083 504 Pfam No apical meristem (NAM) protein 17 148 IPR003441 GO:0003677|GO:0006355
Bisa02g1083 504 MobiDBLite consensus disorder prediction 340 377 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1083 Bisa-ChrBisa02 18067072 18073777 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1083 1 160 NAC Transcription Factor Family AT5G13180 56.250 4.74e-53 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Bisa02g1083 NAM 4.6e-31 No_clan