Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1047 ATGGGCAGATCCCCCTGTTGTGAGAAAGAACACACCAACAAAGGAGCTTGGACCAAAGAAGAAGACCAACGCCTCGTCAACTACATCAACCTCCACGGCGAAGGCTGCTGGCGCTCTCTCCCCAAAGCTGCTGGTTTGCTTAGATGTGGCAAGAGCTGCAGGTTGAGATGGATTAATTACCTCAGACCTGATCTCAAGAGAGGCAACTTCACTGAACAAGAAGACGAGCTCATCATCAGCCTCCACAGCTTACTCGGAAACAAGTGGTCTCTCATAGCGGCGAGATTGCCCGGAAGAACTGACAACGAGATCAAGAACTACTGGAACACCCACATCAAACGCAAACTCTACAGCCGCGGTATCGACCCTCAAACGCACCGTTCCCTCTCCCAAATCACTGACAACAACAACAACATCGACGACGACAACGACAACAAGGACAACGCCAACATTAAAAACAACAAATTCCAGTTGGTGACTGATACTACCACTACCAACCATGTTAATACGAAGCTTATTGGAACCGACTCGTCGGGGGGTGAAGAATCAAACAGCAGCAGTGGGGTGACCACAGAGGAAGCCACGTGTACTCATGTTCCATTAAACTTGGAGCTCTCCATAGGCCTTCCCTGCGACCACCCTTCTTCCGTGGACAAGTTGAAACGACAACGACGAGAGCAGCAACCAGAACGACAGGTTTTGTACAACTGGTATGGCAACTTTAGTAGTAATACTAATAACAGTATTAGTGAAGATGTGTGTTTGTGTTACGGTCTAGGGTTTCACAGTAAGGACAATCAAGCCTGTACCTGCAAATTAGCCATGGGTGGTGTTACTTCTGTTACTTCTAATGGTGGTCCGGCAGTTACTGAAACTGTCAAGAGCGACAATATGTACAGATTTTACACGCCCATGAATATGAATATTTAA 930 0.4731 MGRSPCCEKEHTNKGAWTKEEDQRLVNYINLHGEGCWRSLPKAAGLLRCGKSCRLRWINYLRPDLKRGNFTEQEDELIISLHSLLGNKWSLIAARLPGRTDNEIKNYWNTHIKRKLYSRGIDPQTHRSLSQITDNNNNIDDDNDNKDNANIKNNKFQLVTDTTTTNHVNTKLIGTDSSGGEESNSSSGVTTEEATCTHVPLNLELSIGLPCDHPSSVDKLKRQRREQQPERQVLYNWYGNFSSNTNNSISEDVCLCYGLGFHSKDNQACTCKLAMGGVTSVTSNGGPAVTETVKSDNMYRFYTPMNMNI 309
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1047 309 CDD SANT 69 112 IPR001005 -
Bisa02g1047 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Bisa02g1047 309 MobiDBLite consensus disorder prediction 171 193 - -
Bisa02g1047 309 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Bisa02g1047 309 CDD SANT 16 61 IPR001005 -
Bisa02g1047 309 SMART sant 66 114 IPR001005 -
Bisa02g1047 309 SMART sant 13 63 IPR001005 -
Bisa02g1047 309 FunFam Myb transcription factor 68 137 - -
Bisa02g1047 309 Gene3D - 68 155 - -
Bisa02g1047 309 Gene3D - 14 66 - -
Bisa02g1047 309 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Bisa02g1047 309 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Bisa02g1047 309 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 211 - -
Bisa02g1047 309 FunFam MYB-related transcription factor 13 66 - -
Bisa02g1047 309 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Bisa02g1047 309 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Bisa02g1047 309 MobiDBLite consensus disorder prediction 128 150 - -
Bisa02g1047 309 SUPERFAMILY Homeodomain-like 13 108 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1047 Bisa-ChrBisa02 17426016 17427169 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1047 1 210 MYB Transcription Factor Family AT2G16720 64.516 2.56e-88 263
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g1047 Myb_DNA-binding 9.7e-15 CL0123