Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1046 ATGGACAAGGCACGATTCGGGGTTTTCCTCTTGCTGCTGCTTCTCCTTGCTTCTCAGGAGATGTTGGTGCAGAGCGAGGCGAGACACTGTGAGTCAAAGAGCCATCGGTTTAAGGGGATGTGTTTGAGCCACCACAACTGCGCCTCCGTTTGCCACGTGGAAGGCTTCACCGGCGGCAAGTGCCGCGGTTTCCGTCGCCGGTGCTTTTGCACCAAGGCTTGTTGA 225 0.5689 MDKARFGVFLLLLLLLASQEMLVQSEARHCESKSHRFKGMCLSHHNCASVCHVEGFTGGKCRGFRRRCFCTKAC 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1046 74 PRINTS Purothionin signature 29 44 IPR008176 GO:0006952
Bisa02g1046 74 PRINTS Purothionin signature 59 73 IPR008176 GO:0006952
Bisa02g1046 74 SMART gth_4 29 74 IPR003614 GO:0006952
Bisa02g1046 74 CDD Knot1 41 71 IPR003614 GO:0006952
Bisa02g1046 74 Gene3D - 28 74 IPR036574 -
Bisa02g1046 74 SUPERFAMILY Scorpion toxin-like 28 74 IPR036574 -
Bisa02g1046 74 PANTHER DEFENSIN-LIKE PROTEIN 1 8 74 - -
Bisa02g1046 74 Pfam Gamma-thionin family 28 74 - -
Bisa02g1046 74 ProSitePatterns Gamma-thionins family signature. 28 51 IPR008176 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1046 Bisa-ChrBisa02 17415263 17415594 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1046 9 74 Plant Defensins Gene Families AT2G02130 65.152 6.91e-27 91.7