Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1025 ATGACAACAATAAATCCCTCCTCTTTCGCCTCCTCCTCTCCCATCAGTCTTCATGCTCCACTGAAATCCCCATGTCTCAAGCTTGTTGTCCTACTTTCCAGGAGGTGTTCGGGAGAATATTGCTTGGAGATGAAAGAGGCTTATAATATTCCTTACAAGGGAATGACCAGGTGGCTGATATTCTTCACTATCTTAGGACTCAGTTATGCAACTACTGGTCCTGATGTTGAAGGTGATGCTTTGCTTGACTTTTTGAAGTTCCTCAATGATTCCAATAATCAAATAACAGACTGGAATGGTTATCTTGTGAGCCCTTGCTTTAGTTGGTCTCATGTCACATGTAGAGACGGACATGTCATATCTCTGAGCCTGGATTCAAAAGGATTTTCAGGAACACTTTCTCCTTCAATTACCAAATTGAAATATTTGGTTACCTTGGAATTGCAGAACAATAGCCTTTCAGGTCCGTTACCTGATTATATTGCCAGCTTGACACACCTACAATATCTAAATCTTGCCGACAATAATTTCCATGGTTCTATTCCATCTAAATGGGGCCAACTTTCCACTCTGAAGAATCTGATATTGAGAGGGAACGGTTTATCTGGACCCATACCAGAAACTGTTGCAAATCTTAGTGGGTTAGCAGGATTGGATCTTTCTTCTAATGATCTAACTGGAAGCATCCCTAAGCAACTCTTTTCAGTTCCAACGTTCAACTTTTCAGATACACACCTTCACTGTGGCTTTAGCTTGGAGCAGCCTTGTGTTTCTAATTCATCTCTTCCAGCTTCAACCAATAAATCAAAACTTGCAGTGGCTTTAGGTTTTGCAACTTGTGGGGCATTTGCAATTCTGTGTCTTGGGGCTATCTCTGCATGTGCATACCATTACATCCAGAGACACAAACGTGATGTTTTCATTGATGTTTCAGGTGAAGATGAGAGCAAGATTTCCTTTGGGCAACTGAGAAGACTATCTTGGCGTGAACTTCAGCTAGCTACGAAAAATTTTAGTGAGAGCAATGTGATTGGGCAGGGAGGCTTTGGAAAAGTCTACAAAGGAGTACTCTCAGATAATACAAAGATCGCTGTGAAACGCCTGGCTGATTATCATAATCCTGGTGGAGAGGCTGCATTCCAAAGAGAAGTTCAACTTATAAGTGTTGCAGTTCATAGAAATCTCCTACGTTTAATTGGATTCTGTACAACCTCAACTGAAAGAATCCTCGTATATCCTTTCCTGGAAAATCTAAGTGTAGCATACCGATTGAGAGATTTAAAACCTGAGGAGAAAGGATTGGACTGGCCAACAAGAAAACGTATAGCTTTTGGTACAGCACATGGATTGGAGTATCTACATGAGCATTGTAATCCTAAGATTATACATCGTGATTTAAAGGCTGCAAACATCCTATTAGATGACGAGTTTGAAGCTGTTCTTGGAGATTTTGGGCTGGCTAAGCTGGTTGACACAAGATTGACTAGTGTTACCACTCAGGTGAGGGGCACAATGGGTCATATCGCCCCAGAATACTTGTCCACTGGAAAATCATCAGAGAAAACAGATGTCTTTGGATATGGTATAACACTTCTTGAAATTGTCACTGGTCAACGCGCAATTGACTTCTCTCGGCTTGAAGAGGAGGAGGAAGTTCTTCTGCTTGACCATATAAAAAAGCTGCTGAGAGAGAAAAGGCTGGAGGACATAGTGGATAAAAATCTGGAGAGTTATGATGCCAAAGAAGTGGAGACAATTGTTCAGGTAGCATTGCTTTGCACACAAGGGTTGCCAGAGGATCGGCCAAGCATGTCAGTGGTGGTGAATTTGCTGAAGGGGAAAGGATTGGCGGAGAGATGGGCCGAGTGGGAGCAAATTGAAGAGGTGAACAACAGAGAATTCTCACTGTTGGCTCACCAGTTTGCTTGGGCTGATGAAACCATTCATGATCAAGAGGCTCTACAGCTCTCCAGAGCAAGATAG 1983 0.4236 MTTINPSSFASSSPISLHAPLKSPCLKLVVLLSRRCSGEYCLEMKEAYNIPYKGMTRWLIFFTILGLSYATTGPDVEGDALLDFLKFLNDSNNQITDWNGYLVSPCFSWSHVTCRDGHVISLSLDSKGFSGTLSPSITKLKYLVTLELQNNSLSGPLPDYIASLTHLQYLNLADNNFHGSIPSKWGQLSTLKNLILRGNGLSGPIPETVANLSGLAGLDLSSNDLTGSIPKQLFSVPTFNFSDTHLHCGFSLEQPCVSNSSLPASTNKSKLAVALGFATCGAFAILCLGAISACAYHYIQRHKRDVFIDVSGEDESKISFGQLRRLSWRELQLATKNFSESNVIGQGGFGKVYKGVLSDNTKIAVKRLADYHNPGGEAAFQREVQLISVAVHRNLLRLIGFCTTSTERILVYPFLENLSVAYRLRDLKPEEKGLDWPTRKRIAFGTAHGLEYLHEHCNPKIIHRDLKAANILLDDEFEAVLGDFGLAKLVDTRLTSVTTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLEIVTGQRAIDFSRLEEEEEVLLLDHIKKLLREKRLEDIVDKNLESYDAKEVETIVQVALLCTQGLPEDRPSMSVVVNLLKGKGLAERWAEWEQIEEVNNREFSLLAHQFAWADETIHDQEALQLSRAR 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1025 660 SUPERFAMILY L domain-like 77 247 - -
Bisa02g1025 660 ProSitePatterns Protein kinases ATP-binding region signature. 344 366 IPR017441 GO:0005524
Bisa02g1025 660 SMART serkin_6 338 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1025 660 ProSiteProfiles Protein kinase domain profile. 338 621 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1025 660 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 58 622 - -
Bisa02g1025 660 SUPERFAMILY Protein kinase-like (PK-like) 317 611 IPR011009 -
Bisa02g1025 660 Pfam Protein kinase domain 339 607 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1025 660 Gene3D Transferase(Phosphotransferase) domain 1 416 631 - -
Bisa02g1025 660 ProSitePatterns Serine/Threonine protein kinases active-site signature. 461 473 IPR008271 GO:0004672|GO:0006468
Bisa02g1025 660 Gene3D Ribonuclease Inhibitor 74 258 IPR032675 -
Bisa02g1025 660 Gene3D Phosphorylase Kinase; domain 1 307 414 - -
Bisa02g1025 660 FunFam Leucine-rich repeat receptor-like protein kinase 74 231 - -
Bisa02g1025 660 Pfam Leucine rich repeat N-terminal domain 76 114 IPR013210 -
Bisa02g1025 660 FunFam Somatic embryogenesis receptor kinase 1 307 414 - -
Bisa02g1025 660 FunFam Somatic embryogenesis receptor-like kinase 1 415 631 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1025 Bisa-ChrBisa02 17135459 17139343 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1025 48 660 Receptor kinase-like Gene Family AT5G10290 57.073 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-II Bisa02g1025 Pkinase 1.2e-42 CL0016