Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1015 ATGGGAGATGGTTCCAGTGCCACCATCACCAGCCGCTCTAACAGCAATAGCAGCGGAAACAGCAATAAGCCTGAGTGGCTGCAACAGTACGATTTGATAGGGAAAATTGGGGAAGGTACCTACGGTCTAGTATTCCTCGCAAGGATCAAGTCTCACACGAATCGCGGAAAATCAATCGCCATTAAGAAATTCAAGCAGTCCAAGGATGGCGACGGAGTCTCTCCCACAGCTATCCGTGAAATTATGTTACTAAGGGAGATAACACACGAAAATGTTGTGAAGCTTGTAAATGTTCACATCAACCATGCGGACATGTCTCTGTATCTAGCTTTTGATTATGCTGAACATGACCTTTATGAAATCATTAGGCATCACAGGGACAAAGTGAACTGTTCTATTAATCAATATACTATTAAATCATTACTATGGCAGCTGCTCAATGGACTAAACTATCTGCACAGTAATTGGATAATTCATCGAGATCTGAAGCCATCAAATATATTGGTTATGGGTGAAGGAGAGGAACATGGAGTTGTTAAAATTGCTGACTTTGGACTTGCAAGGATATATCAGGCCCCTCTAAAGCCATTATCTGAAAATGGAGTTGTTGTTACAATTTGGTATCGTGCACCTGAGTTGCTTCTTGGGGCAAAACATTATACCAGTGCTGTCGATATGTGGGCTGTTGGATGCATATTTGCTGAACTGTTGACACTGAAGCCACTATTTCAAGGAGCAGAAGTCAAGGCTACACCAAATCCTTTTCAGCTTGATCAACTTGACAAGATATTCAAGGTTTTAGGCCATCCCACATTAGAAAAGTGGCCTTCCTTAGCATATCTTCCTCATTGGCAACAAGATGTGCAGCATATACAAGGGCACAAATATGACAACACTAGCCTTTGTAATGTTGTACATCTATCTCCGAAAAGTCCTGCTTATGATCTATTGTCAAAGATGCTTGAATATGATCCTCGAAAGCGGATAACAGCAGCACAAGCTTTGGAGCATGAGTATTTCAAAATGGAACAATTGCCCGGGCGTAATGCTCTTGTACCCTGCCAACCTGGAGAGAAAATTGTGAACTATCCCACTCGTCCAGTTGACACAACAACAGATTTTGAAGGGACAACCAATTTGCAATCTTCACAACCGGTTTCATCTGGAAATGCAGTTTCCGGCAGCCTGACAGGTGGTCATTTACCAAATAGATCTGTCCCTCGGGCAATGAATGTTGGTGGCCTGCAAAGGATGCCACATCAAGCAATGCAAGCTTATAATCTTGCATCCCAGGCAGGGATGGGTAGTGGGATGAATCCTGGAAGCATCCCAATGCCACGAGGTGTTGCACAGGCCCATCAGCAGCATCAGTTGAGGAGGAAGGACGGCGGAATGATGTTGCCAGGGTACCCTCCTCAGCAGAAGCCAAGACGTAACTAA 1440 0.4403 MGDGSSATITSRSNSNSSGNSNKPEWLQQYDLIGKIGEGTYGLVFLARIKSHTNRGKSIAIKKFKQSKDGDGVSPTAIREIMLLREITHENVVKLVNVHINHADMSLYLAFDYAEHDLYEIIRHHRDKVNCSINQYTIKSLLWQLLNGLNYLHSNWIIHRDLKPSNILVMGEGEEHGVVKIADFGLARIYQAPLKPLSENGVVVTIWYRAPELLLGAKHYTSAVDMWAVGCIFAELLTLKPLFQGAEVKATPNPFQLDQLDKIFKVLGHPTLEKWPSLAYLPHWQQDVQHIQGHKYDNTSLCNVVHLSPKSPAYDLLSKMLEYDPRKRITAAQALEHEYFKMEQLPGRNALVPCQPGEKIVNYPTRPVDTTTDFEGTTNLQSSQPVSSGNAVSGSLTGGHLPNRSVPRAMNVGGLQRMPHQAMQAYNLASQAGMGSGMNPGSIPMPRGVAQAHQQHQLRRKDGGMMLPGYPPQQKPRRN 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1015 479 MobiDBLite consensus disorder prediction 378 400 - -
Bisa02g1015 479 SMART serkin_6 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1015 479 SUPERFAMILY Protein kinase-like (PK-like) 25 341 IPR011009 -
Bisa02g1015 479 Gene3D Transferase(Phosphotransferase) domain 1 114 354 - -
Bisa02g1015 479 ProSitePatterns Serine/Threonine protein kinases active-site signature. 157 169 IPR008271 GO:0004672|GO:0006468
Bisa02g1015 479 Pfam Protein kinase domain 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1015 479 Gene3D Phosphorylase Kinase; domain 1 14 113 - -
Bisa02g1015 479 ProSiteProfiles Protein kinase domain profile. 30 340 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g1015 479 FunFam Putative cyclin-dependent kinase E-1 114 353 - -
Bisa02g1015 479 CDD STKc_CDK8_like 29 340 - -
Bisa02g1015 479 FunFam Cyclin-dependent kinase e-1 18 113 - -
Bisa02g1015 479 MobiDBLite consensus disorder prediction 435 479 - -
Bisa02g1015 479 MobiDBLite consensus disorder prediction 378 404 - -
Bisa02g1015 479 PANTHER CELL DIVISION PROTEIN KINASE 28 346 - -
Bisa02g1015 479 MobiDBLite consensus disorder prediction 1 22 - -
Bisa02g1015 479 ProSitePatterns Protein kinases ATP-binding region signature. 36 63 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1015 Bisa-ChrBisa02 16985235 16991789 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1015 23 478 Core Cell Cycle Gene Families AT5G63610 76.739 0.0 711
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-CDK8 Bisa02g1015 Pkinase 8.9e-69 CL0016