Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g1011 ATGGTAAAGGAAGAAGTCAGCAATGATAGCTCTTCAAATGTTGAGACTGAGGATTTAGATTCTCAACATAGTTTTGAGAAGGAGACAGACCGGACAAGTTGCCGCGTGTGCCAGTGTGCTGAGTCTGATAAGAGGGGAGATGCTGCACTAGAATTCTTAGGCATCACTCCAGTAATAGAATCACATAGTGATAAAGAAAAATCAGATTTTAAGGAAATTTCAAGAAGTGTGTCTGTTAAAAGAAATGTTGAAAGTAAATCTGGGATCATGGAGTTTGTGAGCCCTGATGGGGAGATTTTCATTTGCAATGCTGATTTGGAAATGGGTCTGTCTCGTCAAGACACTCTAATTGAACTTGGTTGTTGTTGTAAAAATGACCTCGCTATAGTACACTATGCTTGTGCACTTAAATGGTTTGTCAATCATGGATCTACAATCTGTGAAATATGTGGAAATGTTGCAAAAAATATCAGAGTCACCGACTTCAATAAGGTTATTGCTTCTTTGAAAGAACATGAAGCGTTGAGGGAAAGAACTGCCACTGGAGAGCCCAGTCCTGCTCAAGTTCATGCTAATACTGGTGTAGATCCAGATGCCGTGGCTGCTATCCGGAGGCAGCGGCTAAGTGAAATTGCACTATGGTTTTGTCCGCATAATAGTAATAACAGTAACAACAACAATGTGGACACAGTTCAGGTTGTTTCTGATCAACCTTTAAATACTGTTACTGAAGATGCTGCCCCTGTTCAAAACCCTGCAACTAGGTGGGCAGTAGAAGGTACTGGGATCCTGCTTGCTACTGGGCTACTCACTGTCACCCTTGCATGGCTCATAGCACCTCGTGTTGGAAAGAAAACTGCAAGAAGTGGTCTTCATATCTTACTTGGAGGAGTTTGCGCTTTAACAGTTGTGGTTTTTTTCCGCTTTTTCGTGCTTACCAGAATCAAGTATGGACCTGCACGTTACTGGGCAATCTTGTTCATTTTCTGGTTTCTTGTGTTTGGAATATGGGCTTCACGGACACACAGTGCTCATACGACGTGA 1044 0.4224 MVKEEVSNDSSSNVETEDLDSQHSFEKETDRTSCRVCQCAESDKRGDAALEFLGITPVIESHSDKEKSDFKEISRSVSVKRNVESKSGIMEFVSPDGEIFICNADLEMGLSRQDTLIELGCCCKNDLAIVHYACALKWFVNHGSTICEICGNVAKNIRVTDFNKVIASLKEHEALRERTATGEPSPAQVHANTGVDPDAVAAIRRQRLSEIALWFCPHNSNNSNNNNVDTVQVVSDQPLNTVTEDAAPVQNPATRWAVEGTGILLATGLLTVTLAWLIAPRVGKKTARSGLHILLGGVCALTVVVFFRFFVLTRIKYGPARYWAILFIFWFLVFGIWASRTHSAHTT 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g1011 347 SMART ringv_2 101 151 IPR011016 GO:0008270
Bisa02g1011 347 MobiDBLite consensus disorder prediction 1 31 - -
Bisa02g1011 347 ProSiteProfiles Zinc finger RING-CH-type profile. 91 157 IPR011016 GO:0008270
Bisa02g1011 347 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 99 154 IPR013083 -
Bisa02g1011 347 PANTHER ZINC FINGER, RING-CH-TYPE 8 314 - -
Bisa02g1011 347 MobiDBLite consensus disorder prediction 1 18 - -
Bisa02g1011 347 Pfam RING-variant domain 116 150 IPR011016 GO:0008270
Bisa02g1011 347 SUPERFAMILY RING/U-box 116 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g1011 Bisa-ChrBisa02 16972351 16975411 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g1011 6 337 C3H Transcription Factor Family AT5G08750 62.791 8.22e-151 427