Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0997 ATGGAGTTGATCGGACATCGTCAGAAGTTGGACGGAGGAAACGGCGGAGGTCGGACTGTCTTGGTCGGCGTGAAGTTGGATCGTCGGAGCCGGGAACTGCTGATGTGGTCTCTCGTCAAAGTGGCTGAACCGGGCGACCTCGTCATTGCGCTTCACGTGCTTGGCACCAGTACTGAGGATTCAATATCGCATGTCTCTCTATCAAAGTTTTCTGATTCTGTTCTGGAAGAATACGAAGATTTCTGCAGCTTAAAGCAGGTTCCGTACTACTTTCTTCTTCAAGCTTATCGTTTGCTTGAGTTCTGCCTCACTGTTTGCTTGGATGCCAAGAAATTGGCGGGAAATCGTGAGGTGGATCTGGAGTTCAGAGTATGCAGAGGCGCGTCGGCTCGGAAACTTCTAGTACATGAAGCGAAATCGCTAGGCGCAGCGACAATAGTTGCCGGAACTTCTAAGTTCCCCTACACGATCCGATCCTCGGTCTCCGTCGCCAGCTACTGCGCAAGAAAATTGCCCAAGTCTGTATCTGTGATAGCGGTTGATCATGGCAAAGTCGTATTCCGCAGAGAAGCTACTAATCAAGGAAAATCAAACGAAGGCCCAACTTGCTCACAAAATTCCATCTTGGCTCATACGAAGGAAAATCGGAAGGTCTATGTAAGCTCTACACGGGTGTTAGCACCGCCAGAAAATTCTGCGATTAATACGCAAGGGTTGCCTGATGGACATGAAAAGGAAAATTCACTGGCTTCGGTTTCAAGGCAGAAAGCTGATGATGTTCCTAGTAATTCAATCATGGCTCAGAAATCAAAACAGTCAAAATCCGGCTGGTCACTACTGGCCAAGAAGTACATGCGGAAATCTTCATCTGTTTTTAAAAGGGAACTTGGAAAAGACAACCGACATTCTTTAGCCCATCCAGATTTTAAGCAAACTACTATCAACCATAATGAAGGTCCCATTCCTAAAGAATTGTTGGACTTACAGGAGAAGTACTCATCTTCATGTACATTATATAGCTTCGAAGAACTTGCATCTGCCACTTCAAACTTCGCTCCTGAGAATTTGATTGGTCAAGGAGGTAGTAGCCTTGTTTACAGAGGATGTCTTCCCGATGGTAAGGAATTGGCAGTGAAAAGTTTAAGGCAATCCCAAGATGCACTAAAGGAGTTTGTTCTTGAAATTGAGACCATGACAGCTTTGCATCACAAGAACATTATATCCCTTTGCGGGTTTTGTTTCGAGTTCAACAATCTACTATTGGTTTACAACCTTTTATCTAGAGGAAGCCTGGAAGCGAACCTTCACGGTAATAAGAAGGACTCTAATGTGTTTAGTTGGAAAGAGCGGTACAAGGTGGCTGTCGGTACAGCTGAGGCATTGGATTTTCTGCACAATGGCTGTGCACAGACTGTGATCCATAGGGATGTCAAAACTGCGAATATCCTTCTTTCAGATGATTTTGATCCTCAGCTCTCGGACTTTGGAATGGCCTGCCTGAATTCTTCATCCCATGATATTTGTACTGATGTGGTTGGAACTTTTGGGTGTGTAAAATGTCCTTTTGTTCCTCTTTTGAGTACTTGTGCAAAGCCAATTTTGAAGGGTGGGAAGATTTCCGAGTTGCTTGATCCAAGCTTGGGCTTTGATTACGATAAAAGCCAAATTGAAAGAATGGTTTTGGCTGCTACTCTTTGCATCAGACAAGACCCAACATTTCGACCTCAAATCAATCTTATAGTGAAACTTCTACATGGTGATGAAGAAGTAACAAGATGGGCAGAACAAGAAGTTTGTGTCCCAGAGCAACTTTATGTCTTGGATAGCGAACCAGTTCAATCTAATAATATTCAGTCCCATATGAAGCTTGCTTTGCTGGATGTGGAGGATGCAGTTGCTATGGGTAGCCCAGAGCGAAGTATCTCGGTGGAGGAAAATTTGCAAGAAAAATGCAGTGACAAGTTAAGTGATGACTGCGCAGTTCAACGTTCCACCATACTAGGAACAATTGCAAGGACAATGGAGTGGCTCGTTAATTGTTGA 2043 0.443 MELIGHRQKLDGGNGGGRTVLVGVKLDRRSRELLMWSLVKVAEPGDLVIALHVLGTSTEDSISHVSLSKFSDSVLEEYEDFCSLKQVPYYFLLQAYRLLEFCLTVCLDAKKLAGNREVDLEFRVCRGASARKLLVHEAKSLGAATIVAGTSKFPYTIRSSVSVASYCARKLPKSVSVIAVDHGKVVFRREATNQGKSNEGPTCSQNSILAHTKENRKVYVSSTRVLAPPENSAINTQGLPDGHEKENSLASVSRQKADDVPSNSIMAQKSKQSKSGWSLLAKKYMRKSSSVFKRELGKDNRHSLAHPDFKQTTINHNEGPIPKELLDLQEKYSSSCTLYSFEELASATSNFAPENLIGQGGSSLVYRGCLPDGKELAVKSLRQSQDALKEFVLEIETMTALHHKNIISLCGFCFEFNNLLLVYNLLSRGSLEANLHGNKKDSNVFSWKERYKVAVGTAEALDFLHNGCAQTVIHRDVKTANILLSDDFDPQLSDFGMACLNSSSHDICTDVVGTFGCVKCPFVPLLSTCAKPILKGGKISELLDPSLGFDYDKSQIERMVLAATLCIRQDPTFRPQINLIVKLLHGDEEVTRWAEQEVCVPEQLYVLDSEPVQSNNIQSHMKLALLDVEDAVAMGSPERSISVEENLQEKCSDKLSDDCAVQRSTILGTIARTMEWLVNC 680
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0997 680 Gene3D HUPs 17 180 IPR014729 -
Bisa02g0997 680 Gene3D Phosphorylase Kinase; domain 1 321 424 - -
Bisa02g0997 680 CDD USP_Like 19 175 - -
Bisa02g0997 680 SUPERFAMILY Protein kinase-like (PK-like) 332 583 IPR011009 -
Bisa02g0997 680 MobiDBLite consensus disorder prediction 253 271 - -
Bisa02g0997 680 ProSiteProfiles Protein kinase domain profile. 351 655 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0997 680 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 18 178 - -
Bisa02g0997 680 MobiDBLite consensus disorder prediction 229 271 - -
Bisa02g0997 680 Gene3D Transferase(Phosphotransferase) domain 1 426 520 - -
Bisa02g0997 680 SMART serkin_6 351 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0997 680 FunFam probable receptor-like serine/threonine-protein kinase At5g57670 320 425 - -
Bisa02g0997 680 ProSitePatterns Serine/Threonine protein kinases active-site signature. 472 484 IPR008271 GO:0004672|GO:0006468
Bisa02g0997 680 Pfam Protein kinase domain 354 514 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0997 680 ProSitePatterns Protein kinases ATP-binding region signature. 357 379 IPR017441 GO:0005524
Bisa02g0997 680 Pfam Universal stress protein family 18 178 IPR006016 -
Bisa02g0997 680 PANTHER OS08G0249100 PROTEIN 528 620 IPR046958 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0997 Bisa-ChrBisa02 16740065 16745174 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0997 334 580 Trihelix Transcription Factor Family AT1G68690 35.862 4.65e-49 181
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VI Bisa02g0997 Pkinase 4.5e-28 CL0016