Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0993 ATGAACAACAGCACCCGAAAACGCCCCCAACCGGCGGCTCAATCCTCGCCGGCCAACCAGCCTAAGAGCCAAGCATTCTCCCAGGAAGAAGAGTTCGTAGATGAGGACGTCTTCCTCGACGAAACTCTTCTTTCTGAAGATGAAGAGTCCCTTATCCTCCGTGACATTGAGCAACGCCAGGCTCTCGCCTCTCGCCTTGCCAAGTGGACCCGTCCGCACCTCTCGTCTGAGTATCTTTCACAATCTCGTAGCATCATTTTTCAGCAGCTCGAGATTGATTATGTAATAGCGGAGAGTCATAAAGAATTGCTGCCAAATTCGTCTGGACCGGCTGCAATTATTAGAATATTTGGAGTTACAAAGGAAGGACATAGTGTTTGCTGCAATGTTCATGGATTTGAACCATATTTCTACATCAGCTGCCCTCCTGGATTGGGTCCTGATGATGTCTCTCGATTTCATCAAGTCCTTGAGGGGAGAATGAAAGAGTCCAACAGGAACAGTAAAGTGCCAAAATTTGTTCGTCGTATTGAAGTGGTGCAGAGAAGAAGTATTATGTATTATCAGCAGCAGAACTCTCATCCGTTTTTAAAAATTGTAGTTGCTCTGCCAACAATGGTTGCTAGCTGCCGTGGTATTCTTGATAGAGGTATTCAGATTGATGGTCTTGGCATGAAGAGCTTCATGACTTACGAAAGCAATGTACTGTTTGCTCTTCGTTTCATGATTGATTGCAACATAGTTGGTGGAAATTGGATTGAAGTACCTGCTGGAAAATACAAGAAAACAGCAAAAAGCTTGTCTTACTGCCAATTGGAGTTTGATTGCCTGTATTCAGAATTGATTAGTCATGCTCCAGAAGGGGAATTTTCAAAGATGGCTCCATTTCGAATATTGAGTTTTGATATTGAGTGTGCTGGTCGTAAGGGACATTTTCCTGAGCCTTCTCATGATCCTGTTATTCAGATTGCCAATTTGGTCACTTTGCAAGGAGAAGACCAGCCATTTATCCGTAATGTGATGACTCTTAAATCATGTTCTCCTATTGTTGGCACAGACGTAATGTCATTTGATACAGAAAGAGAAGTCCTGTTAGCTTGGAGGGATTTTATCCATGAAGTGGACCCTGATATTATAATTGGATATAACATTTGCAAATTTGACCTGCCATATCTTATTGAGAGAGCTGAGATCCTGAAAATAGCAGAATTTCCAATTCTGGGACGCATCAGGAACAGTAGGGTTCGAGTAAAAGATACAACTTTCTCATCAAGACAGCTTGGGACCAGGGAAAGCAAAGAGGTTACAATAGAAGGGAGAGTTCAGTTTGACTTGCTCCAGGCTGTGCAACGGGATTACAAACTAAGTTCTTATTCGTTGAATTCTGTGTCAGCACATTTCCTTCAAGAGCAGAAAGAGGATGTTCACCATTCGATTATATCTGATCTTCAGAATGGAAATGCTGAAACTAGGAGACGCCTTGCTGTGTATTGTTTGAAGGATGCATATCTTCCTCAGCGGCTTTTGGACAAATTGATGTTTATTTACAATTATGTGGAGATGGCACGAGTAACGGGTGTTCCAATTTCTTTTCTACTTTCTAGAGGGCAAAGCATTAAGGTGCTTTCTCAACTTCTTAGGAAGGCAAAACAGAAGAACTTGGTTATTCCTAATGTCAAGCAGGCTGGGTCAGACCAAGGAACATATGAAGGTGCCACAGTATTGGAGGCAAGGGCCGGATTCTATGAAAAGCCAATTGCTACTTTAGATTTCGCATCTTTGTATCCATCTATTATGATGGCTTATAATTTATGCTACTGCTCTCTGGTGACCCCTGAAGATGTTCGCAAGCTCAACCTCCCTCTGGAGTCTGTGAACAAAACCCCATCTGGTGAAACATTTGTTAAATCAAATTTACAGAAGGGAATACTTCCTGAAATTCTTGAAGAGTTATTGGGGGCACGTAAAAGGGCAAAAGCAGATTTGAAGGAGGCAAAAGATCCTCTTGAGAAGGCTGTGCTAGATGGTCGACAGTTGGCCCTAAAGATTAGTGCAAATTCTGTATATGGATTTACAGGGGCTACTATTGGACAGTTACCTTGTATAGAGATATCTTCAAGTGTAACAAGCTATGGTCGGCAAATGATTGAGCACACAAAAAAACTCGTGGAAGATAAATTTACGACACTTAATGGTTATGAGCACAATGCTGAGGTCATATACGGAGACACAGATTCAGTCATGGTACAATTTGGTGTTTCCACCGTAGAGGAGGCTATGAATTTAGGGAGAGAAGCTGCTGAATACATAAGTGGAACTTTCATGAAGCCCATCAAACTAGAGTTTGAGAAGGTTTACTATCCATACCTCCTGATCAGCAAGAAGAGATATGCTGGTTTGTTTTGGACAAAACCAGACAATTTTGACAAGATGGACACTAAAGGCATTGAAACAGTTCGAAGAGACAATTGTTTATTGGTAAAGAACCTGGTCACTGATTGCCTTCACAAAATACTGATAGACAGGGATATCCCTGGGGCTGTTCAGTATGTCAAGAATGCAATTTCAGATCTTCTCATGAACCGCATGGATTTGTCACTTTTGGTTATTACAAAGGGTTTGACCAAGACAGGAGATGATTATGAAGTAAAGGCAGCTCATGTTGAACTTGCTGAAAGGATGCGCAAGCGAGATGCTGCCACTGCTCCAAATGTTGGTGATAGAGTACCCTATGTTATTATTAAAGCTGCAAAAGGTGCCAAGGCTTATGAGAGGTCAGAGGATCCAATCTATGTACTAGAGAACAACATACCAATAGACCCTCAGTACTATCTTGAGAATCAAATTAGCAAGCCAATTCTGAGGATTTTTGAACCGATTTTGAAGAATGCTAGCAGGGAACTTCTCCATGGAAGCCACACAAGATCTATTTCTATCTCTACCCCATCAAACAGTGGCATAATGAAATTTGCTAAGAAACAGCTTACTTGCATTGGTTGTAGAGCTTTACTTAGCAATGGAGATCGCGCACTCTGCTCTCATTGCAAGGGAAGAGAAGCTGAGCTGTACTGCAAAACAGTCTCTCAAGGTAGGCACCCATTTCAGGTCCCTTGTTCAATTTCAAAGGATTTTGTTGTGCTCGATGGTTCAAGCTGTTTGATCTTTGACAATATAAATATTGGTGTGGCTGCAGTTTCTGATCTCGAGATGCTTTTTGGGAGGCTGTGGACACAGTGTCAAGAGTGCCAAGGTTCACTTCATCAGGATGTTCTCTGCACTAGTCGAGATTGTCCAATCTTTTATCGAAGAAAAAAGGCACAGAAAGATATGGCTGAAGCAAAGTCGCAATTGGACCGGTGGAACTTCTAG 3369 0.4203 MNNSTRKRPQPAAQSSPANQPKSQAFSQEEEFVDEDVFLDETLLSEDEESLILRDIEQRQALASRLAKWTRPHLSSEYLSQSRSIIFQQLEIDYVIAESHKELLPNSSGPAAIIRIFGVTKEGHSVCCNVHGFEPYFYISCPPGLGPDDVSRFHQVLEGRMKESNRNSKVPKFVRRIEVVQRRSIMYYQQQNSHPFLKIVVALPTMVASCRGILDRGIQIDGLGMKSFMTYESNVLFALRFMIDCNIVGGNWIEVPAGKYKKTAKSLSYCQLEFDCLYSELISHAPEGEFSKMAPFRILSFDIECAGRKGHFPEPSHDPVIQIANLVTLQGEDQPFIRNVMTLKSCSPIVGTDVMSFDTEREVLLAWRDFIHEVDPDIIIGYNICKFDLPYLIERAEILKIAEFPILGRIRNSRVRVKDTTFSSRQLGTRESKEVTIEGRVQFDLLQAVQRDYKLSSYSLNSVSAHFLQEQKEDVHHSIISDLQNGNAETRRRLAVYCLKDAYLPQRLLDKLMFIYNYVEMARVTGVPISFLLSRGQSIKVLSQLLRKAKQKNLVIPNVKQAGSDQGTYEGATVLEARAGFYEKPIATLDFASLYPSIMMAYNLCYCSLVTPEDVRKLNLPLESVNKTPSGETFVKSNLQKGILPEILEELLGARKRAKADLKEAKDPLEKAVLDGRQLALKISANSVYGFTGATIGQLPCIEISSSVTSYGRQMIEHTKKLVEDKFTTLNGYEHNAEVIYGDTDSVMVQFGVSTVEEAMNLGREAAEYISGTFMKPIKLEFEKVYYPYLLISKKRYAGLFWTKPDNFDKMDTKGIETVRRDNCLLVKNLVTDCLHKILIDRDIPGAVQYVKNAISDLLMNRMDLSLLVITKGLTKTGDDYEVKAAHVELAERMRKRDAATAPNVGDRVPYVIIKAAKGAKAYERSEDPIYVLENNIPIDPQYYLENQISKPILRIFEPILKNASRELLHGSHTRSISISTPSNSGIMKFAKKQLTCIGCRALLSNGDRALCSHCKGREAELYCKTVSQGRHPFQVPCSISKDFVVLDGSSCLIFDNINIGVAAVSDLEMLFGRLWTQCQECQGSLHQDVLCTSRDCPIFYRRKKAQKDMAEAKSQLDRWNF 1122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0993 1122 SUPERFAMILY DNA/RNA polymerases 552 962 IPR043502 -
Bisa02g0993 1122 Gene3D - 815 970 IPR042087 -
Bisa02g0993 1122 Pfam C4-type zinc-finger of DNA polymerase delta 1064 1103 IPR025687 -
Bisa02g0993 1122 MobiDBLite consensus disorder prediction 1 27 - -
Bisa02g0993 1122 FunFam DNA polymerase 642 694 - -
Bisa02g0993 1122 Gene3D Helix hairpin bin 642 694 - -
Bisa02g0993 1122 CDD DNA_polB_delta_exo 291 519 - -
Bisa02g0993 1122 ProSitePatterns DNA polymerase family B signature. 741 749 IPR017964 GO:0000166|GO:0003676
Bisa02g0993 1122 Pfam DNA polymerase family B 527 960 IPR006134 GO:0000166|GO:0003677
Bisa02g0993 1122 Gene3D Palm domain of DNA polymerase 568 798 IPR023211 -
Bisa02g0993 1122 PRINTS DNA-directed DNA-polymerase family B signature 739 747 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bisa02g0993 1122 PRINTS DNA-directed DNA-polymerase family B signature 586 599 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bisa02g0993 1122 PRINTS DNA-directed DNA-polymerase family B signature 678 690 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bisa02g0993 1122 PANTHER DNA POLYMERASE CATALYTIC SUBUNIT 70 1088 - -
Bisa02g0993 1122 FunFam DNA polymerase 334 568 - -
Bisa02g0993 1122 SUPERFAMILY Ribonuclease H-like 111 533 IPR012337 -
Bisa02g0993 1122 Coils Coil 1103 1122 - -
Bisa02g0993 1122 SMART polmehr3 294 753 IPR006172 GO:0000166|GO:0003676|GO:0003887
Bisa02g0993 1122 Pfam DNA polymerase family B, exonuclease domain 120 463 IPR006133 -
Bisa02g0993 1122 FunFam DNA polymerase 815 971 - -
Bisa02g0993 1122 Gene3D - 295 513 IPR036397 GO:0003676
Bisa02g0993 1122 MobiDBLite consensus disorder prediction 1 30 - -
Bisa02g0993 1122 FunFam DNA polymerase 91 266 - -
Bisa02g0993 1122 NCBIfam DNA polymerase (pol2) 348 958 - -
Bisa02g0993 1122 Gene3D DNA Polymerase, chain B, domain 1 90 266 - -
Bisa02g0993 1122 CDD POLBc_delta 568 961 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0993 Bisa-ChrBisa02 16662545 16686087 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0993 29 1122 Core DNA Replication Machinery Family AT5G63960 80.952 0.0 1870