Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0981 ATGAACGAAGCTGAAATGACGATTCCTCACTTATTCAGATGCCCCATAAGTCTAGACTTGTTCGAGGACCCAGTGACCTTATGCACAGGGCAAACCTACGACAGGTCGAGCATTGAAAGATGGCTGTCTCAAGGTAACCTCACTTGCCCTGTCACAATGCAGAAGCTTCACGATTTGTCCATTGTTCCCAATCACACTCTTCGCCACTTGATCGATCAGTGGCTTCAATTGGACCCTCAATTTCATGGTGACTCCAAAGCCATTGATTCTCTGGCTTCTCTCAAACACACCCTTCTCTCTCACGAATCCACCCTTCAAAACAAGCTCCAAGCACTTGAGAAAATCAGTGTCCTTTCCCATGAGTATTGCTCCTTCAAGAAATCTTGCTTCCTCCAATTGGGTTTCTTGCCTCTTCTTTTTGAACTCGTCTTTGCCTCACACAACCCCACTCAAATGGAGTTCACAGAGCTAGCACTTTCTTGCATTTTAAAGTTGCTTCCTCTTGATAACACTTCACAGTCTCTCAACATTCTCACAGAAAACTCCAAATTCGACTCTTTTTTACTATTACTCGAAATGGGTACAGTTAAAATCAAAACCAGTCTCTGCAGTCTGATAGTTTCAGCAGCAGAATCACACTCGGAAGATTTAATTTCCATGCTTGGAACCTCTCAAAAGCTGGTGAATGAAATCGTGAATCTAATTACCCCAAACAACAACGAGTCCTCCAAGGCAGGAATCAAAGCCATATCAGCCTTATCTTCGGTTCAATCAAACAGAGAGAAGGTGATATCATCAGGGGCAGTGGAAGCCATCATGAGGTACATTTCAAGATGCGAAAGAACAGAGAAGAACTTGGCTCCAATGGGGATGGAGATAATAGAGAAGCTGGTAGCAGCAGAGAGAGGGAAAGAGGCGTTGGTGAATCAGCCAAATGGGATTGAGACTTTGGTGCAGATGGTTTTCAGAGTGAGCAATGAAGAGTGTAGTGAGAATGCAGTGGGGATTCTGATGATGGTGTGCAGAGAAAGTGGGGTTGCTAGAGAGGAAGCCATTAAAGAAGGGGTTTTGACTCAGTTGTTGCTGCTTCTGCAAAGTCAGTGTAGTGCGAGGACGAAGACGAAGGCCAGGATGCTTCTGAAATTGCTGAGATCCAAGTGGGGTGAGAAACCACACAGCAAGTAG 1185 0.4489 MNEAEMTIPHLFRCPISLDLFEDPVTLCTGQTYDRSSIERWLSQGNLTCPVTMQKLHDLSIVPNHTLRHLIDQWLQLDPQFHGDSKAIDSLASLKHTLLSHESTLQNKLQALEKISVLSHEYCSFKKSCFLQLGFLPLLFELVFASHNPTQMEFTELALSCILKLLPLDNTSQSLNILTENSKFDSFLLLLEMGTVKIKTSLCSLIVSAAESHSEDLISMLGTSQKLVNEIVNLITPNNNESSKAGIKAISALSSVQSNREKVISSGAVEAIMRYISRCERTEKNLAPMGMEIIEKLVAAERGKEALVNQPNGIETLVQMVFRVSNEECSENAVGILMMVCRESGVAREEAIKEGVLTQLLLLLQSQCSARTKTKARMLLKLLRSKWGEKPHSK 394
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0981 394 Pfam U-box domain 8 76 IPR003613 GO:0004842|GO:0016567
Bisa02g0981 394 SUPERFAMILY ARM repeat 104 379 IPR016024 -
Bisa02g0981 394 ProSiteProfiles U-box domain profile. 7 81 IPR003613 GO:0004842|GO:0016567
Bisa02g0981 394 FunFam RING-type E3 ubiquitin transferase 8 79 - -
Bisa02g0981 394 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 83 IPR013083 -
Bisa02g0981 394 PANTHER WDSAM1 PROTEIN 5 391 IPR045185 GO:0061630
Bisa02g0981 394 SUPERFAMILY RING/U-box 3 76 - -
Bisa02g0981 394 CDD RING-Ubox_PUB 9 56 IPR045210 -
Bisa02g0981 394 SMART Ubox_2 11 74 IPR003613 GO:0004842|GO:0016567
Bisa02g0981 394 Gene3D - 84 388 IPR011989 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0981 Bisa-ChrBisa02 16494913 16496097 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0981 8 389 U-box Gene Family AT3G19380 32.668 7.88e-52 177