Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0976 ATGTCGAAGAGAATTGTTCATGGTGTGACCTTAACTCTGGATCAGTTATTAGTGTTATACGTCATATTATTTTGTGTATTAGGTTCAGCTTTGTACATTTACAACCCGTGTAAATTTTCTGTGACCGTCTCTTATATGTCATTTTTGCTATATCTGAAAATAAAATGGTTTTTTCTCTTATCATCTTTCATCTGGGTTTTATTTAATGAGATAACAATGCCCAGTAGTAGTGGTGAGAGTAGCAAGAGTTGTAACAGAGGCCATTGGAGACCAGCAGAGGATGAGAGACTAAAACAACTTGTGGAGCAATATGGTCCTCAGAACTGGAATCTTATAGCAGAACACCTTGATGGAAGATCAGGGAAAAGTTGCAGACTGAGGTGGTACAACCAGCTAGACCCAAACATAGTGAAGAGGCCGTTCACAGAAGAAGAGGAAGAAATGCTCTTAGCCCTTCACAAGGTAAAGGGAAACAAATGGGCTGCAATCTCAAGGTTCATGCCAGGAAGAACAGACAATGCTGTGAAGAATCACTTCCATGTTCTAATGGCGAGAAGGAAGAGAGAACGCTTCACACTGTTTGGAGACAGGAGCAACCATGATAATAATGATCATCACATTCACAATAAGCCTAACTCAGGAATTAACTTCAAGTTCCAAAGCAACAGAAACATGGGCATCTTTGGCATTCCTTGGACTACCACTCAAAATGGTACTTCAACCATCACATCAGAGTTAGTGAGCTTTGAAGCTTCTGGTTTAGTTAGTCGTAGCAGTAAGGCTAACAGTGATCATCACTCAAGGCCTTCAAGTTCTAGTTCTTGTATGCTTGGTAGTTACAATAGCTTTACGGCGCCAGGAATTCCCAGTATAGGCAAGGTTGTTCCTCTTCCTTATGACAGGTTCTCAAGCTCCAATTATGGCCAAAGAACTGAGGATTATAACAGTAGAAGCAAGACAGGGAAGACAAATATGGAAGAACAGGCTCAAAAGCTAAAGGGCGTTTCCTTCATAGATTTTCTTGGTGTGGGAAGTTGTTCTGCCAGTGACAGTGGACAATATTGA 1065 0.4094 MSKRIVHGVTLTLDQLLVLYVILFCVLGSALYIYNPCKFSVTVSYMSFLLYLKIKWFFLLSSFIWVLFNEITMPSSSGESSKSCNRGHWRPAEDERLKQLVEQYGPQNWNLIAEHLDGRSGKSCRLRWYNQLDPNIVKRPFTEEEEEMLLALHKVKGNKWAAISRFMPGRTDNAVKNHFHVLMARRKRERFTLFGDRSNHDNNDHHIHNKPNSGINFKFQSNRNMGIFGIPWTTTQNGTSTITSELVSFEASGLVSRSSKANSDHHSRPSSSSSCMLGSYNSFTAPGIPSIGKVVPLPYDRFSSSNYGQRTEDYNSRSKTGKTNMEEQAQKLKGVSFIDFLGVGSCSASDSGQY 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0976 354 ProSiteProfiles Myb-like domain profile. 133 183 IPR001005 -
Bisa02g0976 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 137 187 IPR017930 -
Bisa02g0976 354 SUPERFAMILY Homeodomain-like 85 179 IPR009057 -
Bisa02g0976 354 Gene3D - 140 209 - -
Bisa02g0976 354 Pfam Myb-like DNA-binding domain 89 149 - -
Bisa02g0976 354 SMART sant 137 185 IPR001005 -
Bisa02g0976 354 SMART sant 85 134 IPR001005 -
Bisa02g0976 354 CDD SANT 89 130 IPR001005 -
Bisa02g0976 354 FunFam MYB transcription factor 86 137 - -
Bisa02g0976 354 PANTHER MYB PROTEIN-RELATED 86 264 - -
Bisa02g0976 354 ProSiteProfiles Myb-like domain profile. 81 132 IPR001005 -
Bisa02g0976 354 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 81 136 IPR017930 -
Bisa02g0976 354 CDD SANT 148 183 IPR001005 -
Bisa02g0976 354 Gene3D - 86 137 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0976 Bisa-ChrBisa02 16417025 16421100 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0976 70 347 MYB Transcription Factor Family AT4G33450 43.571 7.29e-64 202
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Bisa02g0976 Myb_DNA-bind_6 8.4e-17 CL0123