Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0972 ATGCCCGCTTGGTGGGGAAGAAAATCCAGCAAGAACAAGGAGGAGCAGCGGCCGCAGCAGCGTCCCCAGCCGGAACCGCATGGAGGCCTTCAGTTTAATTTCATGAAGTCCCCGATTAGGAATGTTGCGAAAAGAGGAAAGGACAAGCCCAAGAGCTTTGACGAGGTCTCCACCATGACGCTTTCTCGGAGTTCACCCAGAGCCAGCAAGGATTTCACTCCTTTCGGTGCTGCTGGGGTTGGTGGTTCGTCCTCGGGATTCGCTTGTTGCTATTCAGGCCATCCCTTGCCTCCACCGTCGGTTTCGTCTCCACAGAGTTTCCGGAACGATCTTGGAGATGGAGATGGCTCGGGATCTGCGTCGATCTCTGGGTCAAGCGTGAGTTCTACCGGGTTTTACGATGATCATCAAATCTCTCAATTTGATGGCATCAGGGGACGAGGTGATATGAACATCAATATGAGGTCAAAAAGCCCAGGTCCTGGGTCTAGAGGACCACCCAGCCCTACTTCACCTCTTCATCCAAAGTTGCATTTTTTGAGTCTTGACTCTCCTACTGGCAAGCTAGATGATGGAAGGAGTCAATGTCATCCGTTGCCTCTTCCGCCTGGTTCACCTACTAGTCCTTCTGCACTTTCCCATAGTCGAGCAAATAGTCTGCTGGAAAACACAACCGGCAATCTGTCCAAGTGGAAGAAAGGAAAGCTTTTAGGACGTGGAACATTTGGGCATGTTTACCTGGGATTTAATAGTGAAAGTGGACAAATGTGTGCAATAAAAGAAGTCAGAGTTTTTTCTGATGATCAAACTTCAAAAGAGTGCCTCAGACAGCTTAATCAGGAGATAAATTTGCTTAGTCAGCTTTCACATCCGAACATCGTTGAATACTATGGGAGTGAACTGGGAGAAGAAGCACTTTCAGTTTATTTGGAATATGTCTCTGGTGGTTCAATCCACAAACTACTTCAGGAATATGGTCCATTTAAGGAACCTGTTATTCAAAATTATGCCAGGCAGATTGTCTCTGGGCTTGCCTATCTGCATGGAAGAAACACAGTACACAGGGATATTAAGGGGGCTAACATACTAGTTGATCCTAATGGTGAAATTAAGTTGGCAGACTTTGGAATGGCTAAACATATAAATTCTTCTACTTCGATGCTTTCTTTCAAGGGAAGTCCATATTGGATGGCACCTGAGGTTGTGATGAATACAAATGGCTATAGTCTTGCTGTGGATATATGGAGCTTGGGATGCACAATTCTTGAAATGGCAACGACAAAGCCTCCATGGAGTCAGTATGAAGGGGTAGCTGCAATTTTTAAAATTGGGAACAGCAAAGATATGCCTGAAATTCCTGAGCATCTTTCAAATGATGCAAAGTCTTTCATAAATCTATGCTTACAAAGAGACCCATCAGCTCGCCCAACAGCTCAAAGGTTACTAGAGCATCCATTTATTCGTGATCAATCAGCAACAAGAGCTGCAAATGTCAGCTTAACCAGGGATGCTTTTCCCTACAGTTTTGATGGAAGCCAGACACTGCCACATCTAGATCTCCATTCCAATAGAAGAAGTATGACTTTACTTGATGGAGATTATGTGACAAAGCCAGCTTTTGCAGCCTCACGAGCATTAAGGAGCCCAATAGATAACACAAGAATGATTACATCTTTACCAGTATCTCCCTGCTCAAGTCCACTGCGACAACATAGACCGACACACAAGAGCTGTATGCTTTCTCCTCCTCATCCAACTTACACTACGATGGGACAAAATACCTACAATTTTAATGACTTCTCTTCATATCCTATGAGATCGAACGTGACATTCACTCTTGATCCTTGGCATGAAACATCTCTGTGCAATGCCCATACACCTGGCGGATCCCCAAGAAGGAAATTCATTTAA 1911 0.449 MPAWWGRKSSKNKEEQRPQQRPQPEPHGGLQFNFMKSPIRNVAKRGKDKPKSFDEVSTMTLSRSSPRASKDFTPFGAAGVGGSSSGFACCYSGHPLPPPSVSSPQSFRNDLGDGDGSGSASISGSSVSSTGFYDDHQISQFDGIRGRGDMNINMRSKSPGPGSRGPPSPTSPLHPKLHFLSLDSPTGKLDDGRSQCHPLPLPPGSPTSPSALSHSRANSLLENTTGNLSKWKKGKLLGRGTFGHVYLGFNSESGQMCAIKEVRVFSDDQTSKECLRQLNQEINLLSQLSHPNIVEYYGSELGEEALSVYLEYVSGGSIHKLLQEYGPFKEPVIQNYARQIVSGLAYLHGRNTVHRDIKGANILVDPNGEIKLADFGMAKHINSSTSMLSFKGSPYWMAPEVVMNTNGYSLAVDIWSLGCTILEMATTKPPWSQYEGVAAIFKIGNSKDMPEIPEHLSNDAKSFINLCLQRDPSARPTAQRLLEHPFIRDQSATRAANVSLTRDAFPYSFDGSQTLPHLDLHSNRRSMTLLDGDYVTKPAFAASRALRSPIDNTRMITSLPVSPCSSPLRQHRPTHKSCMLSPPHPTYTTMGQNTYNFNDFSSYPMRSNVTFTLDPWHETSLCNAHTPGGSPRRKFI 636
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0972 636 Gene3D Transferase(Phosphotransferase) domain 1 228 510 - -
Bisa02g0972 636 Pfam Protein kinase domain 232 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0972 636 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 59 496 - -
Bisa02g0972 636 ProSitePatterns Protein kinases ATP-binding region signature. 237 260 IPR017441 GO:0005524
Bisa02g0972 636 SMART serkin_6 231 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0972 636 FunFam Mitogen-activated protein kinase kinase kinase 229 511 - -
Bisa02g0972 636 ProSiteProfiles Protein kinase domain profile. 231 487 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0972 636 MobiDBLite consensus disorder prediction 103 136 - -
Bisa02g0972 636 MobiDBLite consensus disorder prediction 1 215 - -
Bisa02g0972 636 CDD STKc_MEKK1_plant 230 487 - -
Bisa02g0972 636 MobiDBLite consensus disorder prediction 55 69 - -
Bisa02g0972 636 SUPERFAMILY Protein kinase-like (PK-like) 229 566 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0972 Bisa-ChrBisa02 16395185 16400683 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0972 1 549 MAP Kinase Kinase Kinase AT1G53570 56.738 0.0 547
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Bisa02g0972 Pkinase 3.7e-74 CL0016