Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0958 ATGGATATCAACTCCAACACTACACTCTTCACAAATCTCAACACCACTTGGAACAACAATCTCGAGAATCTCCATGTCCATCTCGACCAAATCCCTCTTTGTTCTTCTGCTTCTTGGCCCAACTGCCCTTACCCTCTTCAGATATCGTCCTCGTACTCCTCGTCTTCGTGCTCGTCCTCGTCCTTGTTCTCGTCGTCTTTAGTGCCCCCTTCTGGCGGGTTTCTAAACGACGTCGTTTTGGAGGAAGACGACGAGGAGGCCGAGGCGGAAGAAGAGCAGCTGGGAGCAATGAAGGAGATGCTGTACAAGATCGCGGCGATGCAGCCGGTGGACATCGACCCGGCCACCATAAGAAAGCCCAAGAGAAGAAACGTGAGAATCAGCGACGACCCTCAAAGCGTAGCCGCAAGACACCGGAGAGAGAGGATCAGCGAGAAGATCAGGATCCTGCAGAGACTTGTCCCTGGAGGCACCAAGATGGACACTGCCTCCATGCTTGATGAAGCCATTCGCTATGTTAAGTTCCTTAAGAGGCAAATCAGGTTGCTTCAGTCTCAACACCCGCCAGCACCACCACAACAGTGCAATGTTACTAATGCTCTTCCAATTCAAAGTGTTGGGGTTATTCCTAACGATCACTGGCCTTTTGCACCACCAAATTTACTTAACTGTCACACTACTGCGGCCGCCGCCACTGCCACCTCCTCCTCCGCCTTGGACATCCCGGCTGCACTGGGATTCAGCGCTCGAGATGGCTCCGCCGCCTATGATCAAGAGTCATGA 783 0.5262 MDINSNTTLFTNLNTTWNNNLENLHVHLDQIPLCSSASWPNCPYPLQISSSYSSSSCSSSSLFSSSLVPPSGGFLNDVVLEEDDEEAEAEEEQLGAMKEMLYKIAAMQPVDIDPATIRKPKRRNVRISDDPQSVAARHRRERISEKIRILQRLVPGGTKMDTASMLDEAIRYVKFLKRQIRLLQSQHPPAPPQQCNVTNALPIQSVGVIPNDHWPFAPPNLLNCHTTAAAATATSSSALDIPAALGFSARDGSAAYDQES 260
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0958 260 Pfam Helix-loop-helix DNA-binding domain 137 176 IPR011598 GO:0046983
Bisa02g0958 260 Coils Coil 166 186 - -
Bisa02g0958 260 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 127 176 IPR011598 GO:0046983
Bisa02g0958 260 Coils Coil 80 100 - -
Bisa02g0958 260 PANTHER TRANSCRIPTION FACTOR HEC3-RELATED 41 204 IPR045843 GO:0003700|GO:0006355
Bisa02g0958 260 SMART finulus 133 182 IPR011598 GO:0046983
Bisa02g0958 260 FunFam BHLH transcription factor 130 192 - -
Bisa02g0958 260 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 132 188 IPR036638 GO:0046983
Bisa02g0958 260 CDD bHLH_AtIND_like 128 186 - -
Bisa02g0958 260 Gene3D - 130 191 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0958 Bisa-ChrBisa02 16082767 16083549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0958 94 193 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G09750 87.255 2.30e-48 158
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Bisa02g0958 HLH 1.3e-06 No_clan