LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g0941	ATGGAATCCGAAGAGTTCATTATCTCCAAAAACGTTAGGGTGGGAGACTATATTCTGAAGACGAAAATCGGGGACGGTTCTTTCTCCACAGTCTGGAGAGCCGAACACAAATTGAGCGGTGACGTGGTGGCGGTGAAACAAGTGTGCCTTTCCAGACTCAATCGCCGCCTCAAATGCAGCTCGGACTGCGAAATCAATTTCTTGTCCTCTGTCAGCCACCCTAATATCATTCGCCTTCTTGACTTCTTCCAGGATGATGGATATTTATACCTGGTCCTGGAGTTTTGTGCTGGAGAAAATCTGGCTTCGTATATTCAGCGCCATGGGAGAGTTGAAGAGCAAACTGCCAGAAAATTCATGCGGCATCTTGGTTCTGGTTTAAAGATATTACACTCTCATGGCATCATTCACAGAGACTTGAAGCCAGAGAATATTTTGCTATCAAGCCAAGGGGGTGATGCAGTGCTGAAGATAGCTGATTTTGGTCTATCAAGAACTTTGCATTCGGGTGAGTATGCTGAGACAGTTTGTGGGTCTCCATTATACATGGCTCCAGAAGTTCTTCAGTTCCAGAGGTATGATGACAAGGCAGACATGTGGAGTGTTGGTGCCATTCTCTTTGAGCTTCTAAATGGCTATCCACCGTTTAATGGAAGGAACCATGTTCAGCTGTTGAAGAACATCAGATCCAGTACATGTCTTCCATTTTCTCAGATGATACTTTCAGGACTAGATCCTGACTGTCTTGATATATGTTCTAGACTTCTGTGCTCAAATCCAGTGGAACGGCTGTCTTTTGATCAGTTTTATTGGCATAGGTTTCTGAGAAAAGTGATGAGGTCTTGA	846	0.4433	MESEEFIISKNVRVGDYILKTKIGDGSFSTVWRAEHKLSGDVVAVKQVCLSRLNRRLKCSSDCEINFLSSVSHPNIIRLLDFFQDDGYLYLVLEFCAGENLASYIQRHGRVEEQTARKFMRHLGSGLKILHSHGIIHRDLKPENILLSSQGGDAVLKIADFGLSRTLHSGEYAETVCGSPLYMAPEVLQFQRYDDKADMWSVGAILFELLNGYPPFNGRNHVQLLKNIRSSTCLPFSQMILSGLDPDCLDICSRLLCSNPVERLSFDQFYWHRFLRKVMRS	281

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g0941	281	Gene3D	Transferase(Phosphotransferase) domain 1	9	281	-	-
	Bisa02g0941	281	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	135	147	IPR008271	GO:0004672\|GO:0006468
	Bisa02g0941	281	SMART	serkin_6	17	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g0941	281	FunFam	Serine/threonine-protein kinase ATG1t	10	281	-	-
	Bisa02g0941	281	SUPERFAMILY	Protein kinase-like (PK-like)	9	278	IPR011009	-
	Bisa02g0941	281	Pfam	Protein kinase domain	18	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g0941	281	FunFam	Aurora kinase A	9	99	-	-
	Bisa02g0941	281	PANTHER	SERINE/THREONINE-PROTEIN KINASE UNC-51-RELATED	9	276	IPR045269	GO:0004674\|GO:0006914
	Bisa02g0941	281	CDD	STKc_ATG1_ULK_like	23	274	-	-
	Bisa02g0941	281	ProSiteProfiles	Protein kinase domain profile.	17	275	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Bisa02g0941	281	ProSitePatterns	Protein kinases ATP-binding region signature.	23	46	IPR017441	GO:0005524

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g0941	Bisa-ChrBisa02	15858841	15862186	Dispersed/Transposed

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g0941	12	277	CBL-interacting serine-threonine protein kinases	AT1G01140	35.036	1.20e-47	163

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	Group-Pl-3	Bisa02g0941		Pkinase	9.4e-72	CL0016