Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0902 ATGGACGGCGATGTAGCTCGTTGGGTACTGGAGTTTCTTCTTCGGAGTGACGTTCCAGATGTGATTGTCAAGAAAATCTTGATGGTTTTGCCGCTCTCTAACATAGATTCGCGGTTGAAAAAGACCTTCCTTCTCAGGTCTATTCGATCTGAAGTGTCTAAGGGCTCACTTATAGAAACCCTATTGGAAAATCTAGAGATTATCGAGGAATTAGACAGGATTGATGGCATTGCAATCACGGATGCCATGAAGCAGGCGTATTGTGCCGTTGCTGTGGAGTGCACCATCAGGTACCTCAAGGCGTCCACGGACAACAACAACCAGAGTTTGTATTTCGACGCGGTCAAGAGGATCTGGAGGGGTCGCGTTCAGGAAATGGAGGAGGCGGAGGAGTCAGGCGAAGGGAGTGAGTTGTTTACTTCTGAGTTGAAGCAGTGGAGGGATGACATCGAGGCTGCGCTTTGGAACTCGAAGGCGTGCGAGTGGTTAGCGAACACGAATGTCAGACAAATTGCGCTCGATAAGGTTAGGGCTTATTTGACAAAAACCTGGGAATTCATAGGCCCTTCATTTCTTGAGTTTGCAGCTTCATTGCCTGAAGTGAAGGGTCCGCATAGTTTACGCGAGGATGATGCAATGGATCATAAACCCGATGAGGGTCGCGTCATGGGTGTTTCTGAATCTGCGTTGGCCTCTGATCCTATGAATGTTGAAGAAAGGTTACAGAATTCAACTAACACGATAGAGATTTTAGTTGCGAGAGATGGAATTGAATTGGATAATGCTGCAATCAGCACGGAGAAGGCCCCAGTGACAGGTGAGAACCGGGACAGTGAGCAATTGGAAGATAGACCTATTTCCTCAGATGATGCAAGTCGCGAATTGGGTGGAATTGACTCACCTCCGAAGACAGAGAGAGCAATTCAGAAGGGCAAGCTGCCACTTAAACATGACCACACTGCACCCTGTACACGACATAGGGGAGTTAAAATTGTTGATGCTGAGGAAGAGAGCCCTAGCAAAAATGACTCTGTGTCTAGTCTTGAAGTTAAAAAACTTCGGGAATCTCTTAAATCAAGTTCTTTGGAGTTACAAGCATTGGTCAAGGATCCTCTTCCTGATACATTACGAGTGTCTGACATTGTAAGATCCGAATTGGCAATGAAGGGCATTCATCATGAGCAACCTCTTGAAAACCAGAGTAGAGATTTAGAAATACCTGAACCAAATACTTGCAGGAGCATTGTACTATATCAACCTCAGAAAAGGCCTTCTGTTAATTGGATGAATGATCATCGTCCCTGCTTAATGGAAAGAAATAGTTCTGCCCATACTTATGAGTGGGATGATTCAATTGATAACTTGCCTGATGGAACACCTAGGAAAAGAAGGAAAGCCAAAAGATGGAGTTCATTGGAAGAGGAAACGTTAAGGGCTGGTGTAAATAAGTTTGGCAGAGGAAAATGGAAATTAATCCTAAATTTCTATAGTGAGATATTTAAAAAGACAGAGAGAACTGAAGTTGATTTGAAGGACAAGTGGAGAAACATGACGCGATAG 1560 0.4442 MDGDVARWVLEFLLRSDVPDVIVKKILMVLPLSNIDSRLKKTFLLRSIRSEVSKGSLIETLLENLEIIEELDRIDGIAITDAMKQAYCAVAVECTIRYLKASTDNNNQSLYFDAVKRIWRGRVQEMEEAEESGEGSELFTSELKQWRDDIEAALWNSKACEWLANTNVRQIALDKVRAYLTKTWEFIGPSFLEFAASLPEVKGPHSLREDDAMDHKPDEGRVMGVSESALASDPMNVEERLQNSTNTIEILVARDGIELDNAAISTEKAPVTGENRDSEQLEDRPISSDDASRELGGIDSPPKTERAIQKGKLPLKHDHTAPCTRHRGVKIVDAEEESPSKNDSVSSLEVKKLRESLKSSSLELQALVKDPLPDTLRVSDIVRSELAMKGIHHEQPLENQSRDLEIPEPNTCRSIVLYQPQKRPSVNWMNDHRPCLMERNSSAHTYEWDDSIDNLPDGTPRKRRKAKRWSSLEEETLRAGVNKFGRGKWKLILNFYSEIFKKTERTEVDLKDKWRNMTR 519
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0902 519 MobiDBLite consensus disorder prediction 264 349 - -
Bisa02g0902 519 Gene3D - 459 519 - -
Bisa02g0902 519 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 461 519 IPR017930 -
Bisa02g0902 519 SMART sant 465 519 IPR001005 -
Bisa02g0902 519 Pfam Myb-like DNA-binding domain 467 517 IPR001005 -
Bisa02g0902 519 ProSiteProfiles Myb-like domain profile. 461 518 IPR001005 -
Bisa02g0902 519 MobiDBLite consensus disorder prediction 305 349 - -
Bisa02g0902 519 MobiDBLite consensus disorder prediction 272 290 - -
Bisa02g0902 519 SUPERFAMILY Homeodomain-like 463 518 IPR009057 -
Bisa02g0902 519 Coils Coil 350 370 - -
Bisa02g0902 519 CDD SANT_TRF 467 519 - -
Bisa02g0902 519 PANTHER MYB TRANSCRIPTION FACTOR 1 519 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0902 Bisa-ChrBisa02 15313184 15316151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0902 467 517 Single Myb Histone (SMH) Gene Family AT1G15720 50.980 1.10e-06 48.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Bisa02g0902 Myb_DNA-binding 3.1e-07 CL0123