Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0901 ATGGAACCCCTCTCTCCCGCCTCTTTCTTCCTCTTATTCTCCCTCACTTTTCTCTCTCTCCACCTTTCTTCCTCATCCTCTGCTTCTTTAGCTTTCAGAGACGCCACTCGGCAGCTTGTCACCTTCAGGAATTCTCTCCCTAACCCGTCTGTACTCCCTAAATGGCTTCCGAATCAAAATCCATGTTCCTTCGATGGCGTTTCCTGCCGCCAAACCTTGATTTCTTCCATAGACCTCAGTTCCATCCCCTTGAGTACTAATTTCAGCCTTGTCTCTACCTATCTTCTCACACTCGACCACTTGCAAGTTCTTATTCTGAAATCCACCAATCTCTCCGGTACCATTGATTTCTCAGCTAGGTCGAGGTGTAGCACCACATTGAGCACCATAGATCTATCGCAGAACAGTTTGTCTGGTTCTGTTTCGTACTTATCTTCTCTGTCGTCCTGTGCGGGCTTGAAATCACTCAACCTTTCAAATAATCACCTGGAATTTTCAGAGAAGGATTCAACGGATTTAAGGCTCAATCTACAGGCCCTCGATCTCTCTAACAACAAGATTTCGGGTCCGAACGTTCTCCCATGGATCTTATCGCGGGGTTGCGACGACATGAAGCACTTGGCTTTGAAAGGGAACAAAATCGCTGGAGAAATCAACTTTTCGTATTGCAAGAATCTGCAGTATCTAGACCTTTCCTCTAACAATCACTCTGTGGCTATTCCATCTTTCGGCGAGTGTTTGACGTTGGAGTACCTCGATATCTCTGCCAATAAGTTTTCCGGTGACATTGGACGCGCCCTCTCCGGTTGCAAGCAGCTCATTCACTTGAACATTTCGAGCAACCAGTTCTCCGGTCCGGTTCCCTCACTTCCGTCTGGTTCTCTGCAGTTCCTCTATCTCGCCGGGAACAATTTCCAGGGATCCATTCCCCGTGGCCTCACCGACTTATGCTCCACCCTCGTCGTACTCGATCTTTCCTCCAACGAACTTTCCGGTACGGTCCGGAGTGATTTCAGGGCTTGTTCTTCGTTGGAATCTTTTGATATATCTAGTAACGAGTTCTCTGGTATACTACCGATTGAAATTTTCATGGAAATGAGTAGCTTGAAGAGGCTTGTCCTTTCCTTCAACGATTTCGTCGGTCCCTTGCCTGAGACTCTGTCTCAGCTCGTGAATTTGGAGATCTTGGATCTGAGTTCTAATAATTTCAGTGGTTCAATACCCACAGGGTTGTGTGAAGATCGTAGGAATAATTTTAAAGAGCTATACCTGCAGAATAATCTGTTCAGGGGTCCTATTCCACCCACACTAAGCAATTGTTCTGAGCTTGTTGCCTTGGATTTAAGTGTCAACTACTTGACGGGGACTATCCCTTCCAGCTTGGGGTCTCTGTCGAACCTTCGAGATTTGATTCTCTGGCTAAACCAGCTCCATGGAGAGATACCCCAAGAGCTCAAGTACATCAGGACGCTTGAGAATTTGATTCTGGACTTTAATGACTTGACTGGGACCATTCCTTCTGGCTTAAGCAACTGCACCTACATGAATTGGATCTCCTTGTCGAATAACAGGTTGAGCGGGGAGATTCCAGGGTGGATTGGCCAGCTTTCGAATCTTGCAATCTTGAAACTGAGTAATAACTCTTTCTCTGGGAGGATTCCTCCAGAGCTCGGGGATTGTAAAAGCCTGATATGGTTGGATCTGAATACTAATTCCCTGGACAGATCAATTCCTCCTGAATTGTTTAAGCAATCTGGGAAAATTGTAATTAATTATATAAGTCAGAAGACATATATGTACATCAAGAACGATGGTAGTAAGGGGTGCCATGGAGCAGGAAATTTGCTGGAGTTTGCAGGTATCAGTCAGGAGCAGATGGACAGATTCGACAGAATTTCTACGAGGAACCCCTGCAATTTCACCAGAGTTTATAATGGTATGGTCAAGCCTACATTTAGCCGCAATGGTTCTATGATTTTTTTGGATCTTTCACACAATATGTTGTCGGGTAGTCTTCCTAAGGAGATGGGGAATATGAACACTTTGTTCATTTTGAACTTGGGGCACAACAGTATATCTGGAAGCATCCCACCAGAATTTGGAAGCATGAAAAATCTCAACATTCTTGATCTCTCCTACAATAGGCTTGAAGGACAAATTCCACAAACCTTGACACGCCTTACTATGCTCACAGATATTGATTTGTCAAACAACAATCTCTCAGGAGTGATTCCAGAGTCAGGTCAATTTGATACCTTTACGGCTAACAAATTTGCTAATAATTCTGGTCTCTGTGGAGTTCCTCTTGCTTCATGCGGGTCAGACTCAGGATCAAGTCCAAATGCGCAACAAAAGTTGAACTGGAAACAAGCATCTCTGGCGAGGAGTGTGTCCATAGGATTGCTGTTCTCGGTCTTCTGTATCCTTGGTTTGATTATAATCGCTTTCGAGGCAAGAAAGAGAAGGAAGAATAAGGAAGCTACCCTTGATGTCTACAGTGACAATCATTCTCATTCAGACTCAGCTAATGTTGGGTGGAGGATGACAGGTGCTCGTGAAGCACTTAGCATAAATCTTGCAACTTTTGAGAAGCCCCTTCGGAAGCTTACTTTCGCAGATCTTCTTGAAGCTACAAACGGTTTTCACAATGATAGTCTTATTGGTTCTGGTGGTTTTGGTGATGTATACAAGGCTCAGTTGAAGGATGGAAGTATTGTGGCGATTAAGAAACTGATACATATAAGTGGACAAGGGGACAGGGAATTCACAGCCGAAATGGAAACCATAGGAAAAATCAAGCATCGAAACCTTGTTCCTCTTCTGGGATACTGTAGAGCTGGAGAAGAAAGACTATTGGTTTATGAATACATGAAATATGGAAGCCTAGAAGATGTTTTACATAACCAGAAGAAAGCTGGGATCAAGCTGAACTGGGCAGCCAGGAGGAAGATTGCAAATGGAGCTGCGAGGGGATTGGCTTTTCTCCACAACTGCATCCCGCACATCATTCACAGAGATATGAAATCAAGCAACGTATTGCTTGATGAGAACTTGGAAGCTAGAGTCTCTGATTTTGGAATGGCTCGGCTTATGAGTGCTATGGATACCCATTTAAGTGTCAGCACATTAGCAGGCACCCCTGGCTATGTTCCTCCCGAATACTACCAGAGCTTTAAATGCTCTACTCGAGGTGATGTTTATAGCTATGGTGTAGTTTTATTGGAGCTACTAACAGGAAAACGACCCACGGATTCAGCTGATTTTGGTGATAACAATCTTGTGGGATGGGTTAAACAGCATGCCAGATTGAAAGTAAGTGATGTTTTTGACCCAGAGCTCATGAAAGAGGATCCGAGTCTTGAGACTGAGCTTTTACAACACTTGAAGATCGCTTGTGATTGTCTTAATGATCGACCTTTGCGGCGTCCCACAATGATTCAAGTCATTGCAATGTTTAAGGAAATCCAAGCTGGGTCTGGAATTGATTCCCAATCTACCATAGCCAGTGAGGATGGGGGTTTCAAAACCGTTGAAATGGTGGAGATGAGCATAGAAGAAGTCCCAGAATTAAGCAAGCAGTAA 3582 0.443 MEPLSPASFFLLFSLTFLSLHLSSSSSASLAFRDATRQLVTFRNSLPNPSVLPKWLPNQNPCSFDGVSCRQTLISSIDLSSIPLSTNFSLVSTYLLTLDHLQVLILKSTNLSGTIDFSARSRCSTTLSTIDLSQNSLSGSVSYLSSLSSCAGLKSLNLSNNHLEFSEKDSTDLRLNLQALDLSNNKISGPNVLPWILSRGCDDMKHLALKGNKIAGEINFSYCKNLQYLDLSSNNHSVAIPSFGECLTLEYLDISANKFSGDIGRALSGCKQLIHLNISSNQFSGPVPSLPSGSLQFLYLAGNNFQGSIPRGLTDLCSTLVVLDLSSNELSGTVRSDFRACSSLESFDISSNEFSGILPIEIFMEMSSLKRLVLSFNDFVGPLPETLSQLVNLEILDLSSNNFSGSIPTGLCEDRRNNFKELYLQNNLFRGPIPPTLSNCSELVALDLSVNYLTGTIPSSLGSLSNLRDLILWLNQLHGEIPQELKYIRTLENLILDFNDLTGTIPSGLSNCTYMNWISLSNNRLSGEIPGWIGQLSNLAILKLSNNSFSGRIPPELGDCKSLIWLDLNTNSLDRSIPPELFKQSGKIVINYISQKTYMYIKNDGSKGCHGAGNLLEFAGISQEQMDRFDRISTRNPCNFTRVYNGMVKPTFSRNGSMIFLDLSHNMLSGSLPKEMGNMNTLFILNLGHNSISGSIPPEFGSMKNLNILDLSYNRLEGQIPQTLTRLTMLTDIDLSNNNLSGVIPESGQFDTFTANKFANNSGLCGVPLASCGSDSGSSPNAQQKLNWKQASLARSVSIGLLFSVFCILGLIIIAFEARKRRKNKEATLDVYSDNHSHSDSANVGWRMTGAREALSINLATFEKPLRKLTFADLLEATNGFHNDSLIGSGGFGDVYKAQLKDGSIVAIKKLIHISGQGDREFTAEMETIGKIKHRNLVPLLGYCRAGEERLLVYEYMKYGSLEDVLHNQKKAGIKLNWAARRKIANGAARGLAFLHNCIPHIIHRDMKSSNVLLDENLEARVSDFGMARLMSAMDTHLSVSTLAGTPGYVPPEYYQSFKCSTRGDVYSYGVVLLELLTGKRPTDSADFGDNNLVGWVKQHARLKVSDVFDPELMKEDPSLETELLQHLKIACDCLNDRPLRRPTMIQVIAMFKEIQAGSGIDSQSTIASEDGGFKTVEMVEMSIEEVPELSKQ 1193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0901 1193 ProSitePatterns Protein kinases ATP-binding region signature. 887 910 IPR017441 GO:0005524
Bisa02g0901 1193 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 650 772 - -
Bisa02g0901 1193 Gene3D Transferase(Phosphotransferase) domain 1 957 1157 - -
Bisa02g0901 1193 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 415 594 - -
Bisa02g0901 1193 CDD STKc_IRAK 887 1155 - -
Bisa02g0901 1193 Pfam Leucine Rich repeat 246 268 IPR001611 GO:0005515
Bisa02g0901 1193 Gene3D Ribonuclease Inhibitor 39 772 IPR032675 -
Bisa02g0901 1193 PANTHER LEUCINE RICH REPEAT FAMILY PROTEIN, EXPRESSED 418 1153 - -
Bisa02g0901 1193 Pfam Leucine rich repeat N-terminal domain 36 69 IPR013210 -
Bisa02g0901 1193 SUPERFAMILY L domain-like 64 409 - -
Bisa02g0901 1193 SUPERFAMILY Protein kinase-like (PK-like) 867 1156 IPR011009 -
Bisa02g0901 1193 Gene3D - 591 654 - -
Bisa02g0901 1193 SMART LRR_typ_2 390 414 IPR003591 -
Bisa02g0901 1193 SMART LRR_typ_2 536 560 IPR003591 -
Bisa02g0901 1193 SMART LRR_typ_2 561 584 IPR003591 -
Bisa02g0901 1193 SMART LRR_typ_2 150 173 IPR003591 -
Bisa02g0901 1193 SMART LRR_typ_2 727 750 IPR003591 -
Bisa02g0901 1193 SMART LRR_typ_2 703 726 IPR003591 -
Bisa02g0901 1193 Gene3D Phosphorylase Kinase; domain 1 843 956 - -
Bisa02g0901 1193 FunFam serine/threonine-protein kinase BRI1-like 2 842 956 - -
Bisa02g0901 1193 FunFam Brassinosteroid LRR receptor kinase 957 1157 - -
Bisa02g0901 1193 SUPERFAMILY L domain-like 295 579 - -
Bisa02g0901 1193 ProSiteProfiles Protein kinase domain profile. 881 1155 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0901 1193 Pfam Brassinosteroid receptor island domain 586 653 IPR045381 -
Bisa02g0901 1193 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 176 414 - -
Bisa02g0901 1193 ProSiteProfiles Leucine-rich repeat profile. 176 197 IPR001611 GO:0005515
Bisa02g0901 1193 Pfam Protein kinase domain 881 1149 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0901 1193 Pfam Leucine rich repeat 489 548 IPR001611 GO:0005515
Bisa02g0901 1193 Pfam Leucine rich repeat 700 740 IPR001611 GO:0005515
Bisa02g0901 1193 PRINTS Leucine-rich repeat signature 703 716 - -
Bisa02g0901 1193 PRINTS Leucine-rich repeat signature 320 333 - -
Bisa02g0901 1193 SUPERFAMILY L domain-like 649 770 - -
Bisa02g0901 1193 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1002 1014 IPR008271 GO:0004672|GO:0006468
Bisa02g0901 1193 SMART serkin_6 881 1152 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0901 Bisa-ChrBisa02 15279342 15282923 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0901 26 1189 Receptor kinase-like Gene Family AT4G39400 67.632 0.0 1528
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-Xb-1 Bisa02g0901 Pkinase 1.2e-46 CL0016