LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Bisa02g0900	ATGTCAACAGCCTCCCAATCTATCGTGAACCATAGTAGTAATTTGTTCGAGGAGCAGCAGGATGAGATGGCTACGCAGCTAGGCTTCCTTCCTAATAATTTCCCAGCAAATCTGAGTTTTCCTCCTTTTGGTTGCCACCAGATATCTTTGAAGGCCTTCAATAACATCGCTATGCCTCCTTCTCTTTCATCTTCTCAAACTGCAAATCTCACCGAAACCCTACTCGCAGCCTCTGCTCACAAGCCAACTCAAGATCTCACTTCCAGCTTCGATGCACCAACCCAACTCCTCTCCTTGCATACCTCAACTGTGCTAAATCCATGGGGATTGGGAGAAGTGGGAGATTGGTGGAGCAGTAAAAGAAGTGGAGGAGAGGGACATGGACAGTTAGGGATATCTGCGATGAAGATGAAAAAGATGAAGGGAAGGAGAAAGGTGAGGGAACCTAGGTTTTGCTTCAAGACCATGAGCGATGTGGATGTGTTGGATGATGGCTACAAATGGAGGAAGTACGGTCAGAAGGTGGTCAAGAATACTCAGCACCCCAGAAGCTACTATCGTTGCACGCAAGACAATTGTCGGGTAAAGAAGAGAGTGGAACGTTTGGCGGAGGATCCGAGGATGGTGATAACAACGTATGAAGGAAGACATGTACACTCTCCTTCAAATGATCTTGAAGATTCTCAAGCTCCTAATTCTCAGTTTACCAACTTCTTGTGGTAG	723	0.4633	MSTASQSIVNHSSNLFEEQQDEMATQLGFLPNNFPANLSFPPFGCHQISLKAFNNIAMPPSLSSSQTANLTETLLAASAHKPTQDLTSSFDAPTQLLSLHTSTVLNPWGLGEVGDWWSSKRSGGEGHGQLGISAMKMKKMKGRRKVREPRFCFKTMSDVDVLDDGYKWRKYGQKVVKNTQHPRSYYRCTQDNCRVKKRVERLAEDPRMVITTYEGRHVHSPSNDLEDSQAPNSQFTNFLW	240

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Bisa02g0900	240	Gene3D	WRKY domain	149	215	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g0900	240	MobiDBLite	consensus disorder prediction	224	240	-	-
	Bisa02g0900	240	FunFam	WRKY transcription factor 57	148	222	-	-
	Bisa02g0900	240	ProSiteProfiles	WRKY domain profile.	157	222	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g0900	240	SUPERFAMILY	WRKY DNA-binding domain	154	221	IPR036576	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g0900	240	SMART	WRKY_cls	162	221	IPR003657	GO:0003700\|GO:0006355\|GO:0043565
	Bisa02g0900	240	PANTHER	WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED	95	223	IPR044810	GO:0003700
	Bisa02g0900	240	MobiDBLite	consensus disorder prediction	218	240	-	-
	Bisa02g0900	240	Pfam	WRKY DNA -binding domain	163	219	IPR003657	GO:0003700\|GO:0006355\|GO:0043565

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Bisa02g0900	Bisa-ChrBisa02	15269598	15271198	Proximal

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Bisa02g0900	132	240	WRKY Transcription Factor Family	AT4G39410	76.991	7.17e-62	194

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	TF	WRKY	Bisa02g0900		WRKY	1e-24	CL0274