Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0881 ATGACAGGGAAGAGAAACACCCAAACCAGTCCGGTAGGAAGCCCAACCTCCGGCAACATCTCCGACAGCTCTTCCAAGGAGCAACAAGACAGGTTTCTCCCCATAGCCAACGTTAGCCGAATCATGAAAAAGGCACTTCCGGCGAACGCCAAAATCTCGAAGGAGGCGAAAGAGACCGTCCAAGAATGCGTGTCGGAGTTCATCAGCTTCATCACCGGCGAAGCCTCCGACAAGTGCCAGAGGGAGAAGAGGAAGACGATCAACGGCGACGATCTTCTCTGGGCCATGACGACGCTGGGGTTCGAGAACTACGTCGGACCCCTGAAGGTGTACCTCAACAATTACAGAGAGACAGAGGGAGAGAAGAGCTGTGTAGGGACGAGACAAGAAGATCACTCTCCCACTGAAACTAACGATGGGGTTGCTGAATTCAACAAGATGGGTAGTTCCGCGTCAGCAAAATCGGATTTTTCGAGTTTCAATGGTGGGTTTTACTCTGTTATGTCTCAGGTTAATCAGAAGAGCTTCACGGAGACCGGAGGGTTCACTGGCTTCAGAGATAATTCAATGAATATGGCTGTGGCTCAGAGTGCAGTTCATAACGATGCAGATGGAAATCTGCGATACAGGGTTGAATGGTAG 642 0.5062 MTGKRNTQTSPVGSPTSGNISDSSSKEQQDRFLPIANVSRIMKKALPANAKISKEAKETVQECVSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFENYVGPLKVYLNNYRETEGEKSCVGTRQEDHSPTETNDGVAEFNKMGSSASAKSDFSSFNGGFYSVMSQVNQKSFTETGGFTGFRDNSMNMAVAQSAVHNDADGNLRYRVEW 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0881 213 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 18 148 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa02g0881 213 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 32 96 IPR003958 -
Bisa02g0881 213 Gene3D Histone, subunit A 19 157 IPR009072 GO:0046982
Bisa02g0881 213 MobiDBLite consensus disorder prediction 1 31 - -
Bisa02g0881 213 FunFam Nuclear transcription factor Y subunit B-3 21 145 - -
Bisa02g0881 213 SUPERFAMILY Histone-fold 29 143 IPR009072 GO:0046982
Bisa02g0881 213 ProSitePatterns NF-YB/HAP3 subunit signature. 63 79 IPR003956 GO:0005634|GO:0006355|GO:0043565
Bisa02g0881 213 PRINTS CCAAT-binding transcription factor subunit A signature 98 116 - -
Bisa02g0881 213 PRINTS CCAAT-binding transcription factor subunit A signature 60 78 - -
Bisa02g0881 213 PRINTS CCAAT-binding transcription factor subunit A signature 79 97 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0881 Bisa-ChrBisa02 14965881 14966522 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0881 24 131 CCAAT-HAP3 Transcription Factor Family AT4G14540 85.185 1.23e-64 195
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa02g0881 CBFD_NFYB_HMF 3.9e-27 CL0012