Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0863 ATGAATTTATGTATTGAGTTTGGTGAATTGAGTGAGATTGTGGAGTTGTTGAGGATAGACCAAAAAACGAGCAATGAGAATCCCAAATTGGTGAAGGAGTTTTGTGTTTATGAACTACAATGTCCCAATCATTCCAAGAATAACAGCAGACGCTTGAAGGAAGCCGCATGGCTTGCCAGCTTTCTAGAATATAGATCTGGGGAGAGGCAGGGTCCTGGACTGATTTGCTTGGTAGTTTCAAGTCAAGCGAAGCTGGCGACTACACTGTCTTGGAGGTTGGCTGCCAATAATGGCAGCAGCCTTGCCGCTAATGATGTGGAAAGAAATGGTGAGGGGAAGGCTCATGATTCAGAACCACCAACTCCGCATTCTGTTCTGAAATTGGGATTAAGAGAGCGTAGTAGTAGCATGGAGGATCCAGATGGGACGTTAGCAAGTGTTGCCCAATGCATTGAGAAACTGCGTCAGAGCTCATCCTCTGTGCAAGAGAAAGAGCATTCCTTGAAACAGTTATTGGAGCTTATTGATATGCGTGAAAATGCTTTCAGTGCTGTTGGATCTCACTCTCAAGCAGTTCCAGTACTTGTTTCTCTTCTACGGTCAGGGCCATTGAGTGTGAAGATACAGGCAGCAACTGTATTGGGTTCCCTTTGTAAAGAAAATGAGTTGAGGGTGAAAGTCTTACTTGGAGGATGCATTCCTCCATTGCTTGGTCTGCTCAAGTCCAATTCAGCTGAAGGTCAAGTTGCCGCTGCAAAGACTATTTATGCTGTCTCTCAAGGTGGTGCAAAAGATCATGTTGGATCAAAAATTTTTTCAACTGAAGGGGTTGTACCAGTGCTTTGGGAGAAGCTTCAGAAGGGGCTGAAGACAGGAAATGTAGTTGACAGTTTATTGACTGGAGCTTTAAAAAATCTGTCCAGCAATACTGAGGGGTTCTGGAATTCAACAATACAAGCTGGAGGAGTGGACATATTAATGGAGTTGCTAACAAAAGGACATTCTAGCACTTTAGCCAATGTTTGCTTTTTACTTGCCTGTATGATGATTGAGGATGCATCTGTTTGTTCAAAGGTGTTGACAGCAGATGCGACAAAACAACTCCTCAAACTACTAGGCCCTGGCAATGATGCCCCTATTAGAGCCGAAGCAGCTGGTGCTCTTAAATATCTGTCTGCCCAGTGCAAAGAAGCGAGGCGGGAGATTGCTAATTTTAATGGCATTCCTGTTCTAATCAATGCTACAATAGCTCCTTCAAAAGAATTCATGCAGGGTGAATATGCCCAAGCATTGCAGGAGAATGCTATGTGTGCTCTAGCAAACATCTCTGGTGGTTTATCTTATGTCATCTCCAGCCTTGGTCAAAGCCTTGAATCATGCACCTCACCTACCCAAATTGCTGACACATTAGGGGCTTTGGCTTCAGCTCTTATGATATATGACAACAGGGCTGAATCAACAAGAGCATCCGATCCTTTGGTAGTTGAACAGACATTACTCACGCAATTCAAACCTCGTTTACCCTTCCTTGTGCAAGAAAGAACCATTGAAGCCCTAGCTAGTTTGTATGGCAATCCAATACTCTCAATTAAACTAGCTAATTCTGATGCAAAACGCTTACTTGTTGGTTTAATAACAATGGCTTCCAATGAAGTTCAAGGTGAGCTGATAAAAGCTCTCTTGACACTATGCAATAATGAAGGCAGTCTATGGCAAGCACTTCAAGGCCGTGAAGGAGTTCAGCTGTTGATATCTCTTTTGGGTCTTTCATCAGAACAACAGCAGGAATGTGCAGTGGCTCTGCTATGCCTTCTATCTAATGAAAATGATGAAAGTAAATGGGCCATTACTGCTGCTGGTGGCATACCTCCACTTGTTCAGATATTAGAGACAGGATCTGCTAAAGCAAAGGAAGACTCAGCAACAATCCTAAGGAACCTCTGCAATCATAGTGAAGATATACGGGCTTGTGTTGAAAGCGCTGATGCTGTCCCTGCATTGTTGTGGTTATTGAAGAATGGAAGCCCAAATGGAAAGGAGATAGCAGCAAAGACCCTAAATCACTTAATTCATAAATCTGATACAGCCACTATCAGTCAGCTTACAGCATTATTAACTAGTGATCTACCTGAATCTAAGGTTTATGTTTTGGATGCTTTGAGAAGTATGCTTCTTGTAGCTCCTCTTAGTGACATTCTACGTGAGGGTAGTGCTGCCAGCGATGCAGTTGATACAATGATTAAGATAATGAGCTCTACCAAGGAAGAAACTCAGGCAATGTCTGCATCAGCTCTGGCAGGAATTTTTGAAATGAGAAAAGATGTCCGTGAAAGCAGCATAGCTGTTAAAACTCTTTGGTCAGCCATGAAATTGCTCAATGTTGAATATGACAGCATCCTTATGGAATCCTCACGCTGTATGGCTGCAATATTTCTTTCCATCAAAGAAAACAGGGAAGTAGCTGCTATTGCTAAAGATGCATTATCTCCCCTTGTTGCACTTGCTAACTCTTCAGTTTTGGAAGTAGCAGAGCAGGCAACATGTGCTGTGGCAAATCTTATTTTGGATAGTGAAATTTCAGAGAAAGCTGTTGCAGAAGAAGTAATCTTGCCTGCTACTAGAGTGTTACGTGAAGGCACATTTTCTGGAAAAGCCCTAGCTGCAGCAGCAATTGCTCGCCTCTTACGTTCTCAAAAAGCTGATTATGCTGTAACTGATTGTGTGAATCATGCTGGCACTGTTCTTGCTTTGATTTCTTTCTTAGATTCTGCTATTAATGGATCTATTTCCTCATCAGAGGCTCTAGAGGCCCTTGCTGTCCTTTCCAGGTCAGAAGAGACCAGTGGACATATTAGACCTGCATGGGCTGTTTTGGCTGAATTCCCTAAAAGCATAAGTCCAATAGTCCTGTCTATTGCTGATTCAACACCAATGTTGCAGGATAAAGCTATTGAGATCTTATCCCGATTATGCGGAGATCAGCCTGTTGTTTTAGGAGAAACTGTTGTTGCTGCCTCCGGATGTATATGTTCAATAGCTAAGAGAATAATCAGCTCCAGAAATGTAAAAGTCAAAATTGGGGGAGCTGCACTCCTTATATGTGCTGCAAAAGTAAATCACCAGAGAGTAGTAGAGGATCTCAATCAATCAAACCTGTGTGCTGATCTTGTTCAGTCACTTGTTGGGATGCTTGTTTTAGGACATCCCTCTTTGGATGATCGGGGCGATGATAACAAAGAACTAATCAGTATATGCAGGCATGCTAAAGAAGAGGAGAATGGTGGTCAATCCAATGCTGGAACCAACATCATAAGTGATGCCAACTTAGCCATATGGTTACTGTCTGTTCTTGCTTGTCATGATGAAAAAAGTAAAATTGCAATAATGGAGGCTGGGGCAATTGAGGTTCTCACCGACAGGATCTCAGAATGTTTCTCACAATATACCCAGATTGACTATAAAGAAGATAGTAGCATGTGGATTTCTGCTTTGCTGTTGGCGATATTATTTCAAGACAGAGATATCATACGCGCACATGCAACCATGAAATCTATACCAGTACTTGCCAATTTAGTGAAGTCAGAGGAATCAGCAAACAGATATTTTGCTGCACAAGCAATAGCTAGCCTAGTTTGTAATGGTAGCAGGGGAACACTACTGTCTGTTGCAAATTCTGGGGCTGCAGGTGGGCTTATCTCCTTGCTTGGCTGTGCTGATATTGACATACAGGACCTTCTGGAATTGTCAGAAGAATTCTCTTTGGTGCATTATCCTGACCAAGTTGCTCTTGAGAGGTTGTTTAGAGTTGATGACATAAGAGTTGGTGCCACTTCTCGGAAGGCAATACCTGCTCTAGTTGATCTGCTCAAGCCAATTCCAGATCGCCCAGGAGCACCATTTTTAGCACTTGGGCTTCTGACTCAGCTTTCTTTAGATTGTCCATCAAATAAGATTGTAATGGTAGAGTCCGGGGCCTTAGAGGCACTTACTAAGTATCTTTCTCTGGGTCCACAAGATGCAACTGAAGAAGCTGCTACTGATCTCTTAGGAATTCTGTTTAGCAGTGCTGAGATACGAAGACATGAATCAGCATTTGGGGCTGTTACACAACTTGTAGCTGTCCTACGTTTAGGAGGAAGAGGTGCAAGGTATAGCGCTGCAAAAGCCTTGGAAAGTTTGTTCTCTGCTGACCATATTAGGAATGCAGAGACTGCTCGACAAGCTGTTCAGCCCTTGGTGGAGATTCTTAATACTGGTTTAGAGAGGGAGCAACATGCCGCAATTGCTGCATTAGTTAGGTTACTAAGTGAAAATCCATCAAAAGCACTTGCTGTTGCTGATGTTGAAATGAATGCAGTAGATGTGCTTTGCAGGGTCCTTTCATCAAATTGTTCAATGGATCTAAAAGGGGATGCTGCTGAATTATGTTGTGCTCTTTTTGGAAATACAAGGATCCGGTCCACGATGGCCGCTGCACGCTGTGTTGAACCTCTAGTTGCTCTCCTTGTGACTGAGTTTAGTCCTGCTCAGCTTTCAGTCGTCCGCGCATTGGATAGGCTTGTTGATGATGAGCAACTAGCAGAATTAGTTGCTGCACATGGTGCAGTTATTCCTCTTGTTGGGCTACTTTACGGTAGGAATTATGTACTTCATGAAGCCACATCTAGAGCTTTGGTCAAGTTAGGAAAAGACAGGCCTGCTTGTAAAATGGAAATGGTGAAAGCTGGAGTTATTGAAAGCATACTTGACATCCTCCATGATGCACCTGATTATCTATGTGCAGCCTTTGCAGAGTTGCTGCGTATATTGACTAATAATGCTAGCATAGCTAAAGGCCCTTCTGCTGCTAAAGTGGTTGAGCCTCTATTTTTGTTGCTGACAAAACAAGAATTTGGACCTGATGGACAGCATAGTGCATTGCAGGTTTTGGTCAATATTTTAGAACATCCACAGTGTCGTGCTGACTATACATTGACTTCTCACCAAGCTATTGAACCACTTGTCCCCTTGCTTGATTCTCCAATATCAGCTGTGCAACAGTTGGCTGCTGAGCTTCTCTCACATCTACTTCTGGAAGAACACCTTCAGAAAGATCCACTGACACAACAAGTAATTGGTCCTCTTATACGAGTTCTTGGTTCTGGTATACACATTTTGCAGCAGAGAGCTGTCAAGGCTCTAGTTAGCCTTGCACCAACATGGCCAAATGAAATTGCAAAAGAGGGTGGTGTTATAGAGATTTCCAAAGTGATATTGCAAGCTGATCCTTCCCTTCCTCATGCATTATGGGAGTCTGCTGCCTCTGTTTTGTCAAGTATACTGCAATTTAGTTCTGAATTTTACTTGGAAGTGCCTGTTGCTGTGTTGGTAAGGTTGCTTAGATCTGGCTCAGAGGGCACAGTTATTGGTGCATTAAATGCTCTTCTGGTGTTGGAAAGTGATGATGGGACTAGTGCAGAAGCAATGGCGGAAAGTGGTGCCATAGAGGCTCTCTTGGAGCTTCTAAGATCTCATCGGTGCGAGGAAACTGCTGCACGGCTCTTAGAAGTATTGCTGAACAATGTAAAGATCAGAGAAACAAAAGCTACTAAATCAGCCATCTTGCCATTATCCCAGTACCTCTTGGATCCACAAACCCAAGCGCAGCAGGCAAGGTTATTGGCAACTTTGGCTCTTGGTGATCTATTTCAGAATGAGAGTCTTGCTCGGACAACTGATGCAGTTTCAGCTTGTCGTGCTTTAGTGAATGTGCTTGAAGACCAACCAACAGAAGAAATGAAAGTTGTAGCCATATGTGCTTTGCAAAACCTTGTAATGTACAGTCGATCAAATAAAAGAGCAGTTGCTGAGGCTGGTGGTGTTCAGGTTGTATTGGATCTGATTGGTTCAAGTGACCCAGAAACTTCTGTTCATGCTGCAATGTTTATTAAACTTCTCTTCTCCAATCATACTATTCAAGAGTATGCTTCGAGTGAAACAGTCCGAGCAATAACTGCTTCTATTGAAAAGGATTTATGGGCCACTGGAACGGTGAATGATGAGTATCTGAAAGCCTTAAATGCTCTTTTCAGCAACTTTCCACGACTGAGAGCAACTGAACCAGCAACACTGAGTATTCCCCATCTTGTTACATCATTGAAGACAGGATCAGAGGCAACTCAGGAAGCTGCCTTGGATGCACTTTTTCTGCTCAGACAAGCTTGGTTGGCATGCCCAGCAGAAGTTTCAAGAGCTCAGTCAATAGCTGCAGCAGATGCTATTCCATTGCTGCAGTACTTAATTCAGTCTGGCCCACCTCGGTTTCAGGAGAAGGCAGAATTTTTATTGCAGTGTTTGCCTGGGACATTAGTTGTGATCATCAAGCGTGGTAACAATATGAAGCAGTCAGTTGGAAACCCGAGTGTTTACTGTAAGCTTACACTTGGAAACACTCCTCCAAAGCAAACCAAGGTGGTCTCAACTGGCCCTAATCCAGAGTGGGATGAGAGCTTTTCATGGTCCTTTGAGAGTCCTCCAAAAGGCCAGAAGCTTCACATTTCTTGCAAAAACAAGAGCAAAGTGGGAAAGAGTTCATTTGGGAAAGTGACAATCCAGATTGATCGTGTCGTAATGCTGGGTGCAGTAGCTGGAGAGTACACTCTATTACCGGAAAGTAAAAGTGGTCCTTCAAGGAATTTAGAAATAGAATTTCAATGGTCTAACAAGTGA 6708 0.4313 MNLCIEFGELSEIVELLRIDQKTSNENPKLVKEFCVYELQCPNHSKNNSRRLKEAAWLASFLEYRSGERQGPGLICLVVSSQAKLATTLSWRLAANNGSSLAANDVERNGEGKAHDSEPPTPHSVLKLGLRERSSSMEDPDGTLASVAQCIEKLRQSSSSVQEKEHSLKQLLELIDMRENAFSAVGSHSQAVPVLVSLLRSGPLSVKIQAATVLGSLCKENELRVKVLLGGCIPPLLGLLKSNSAEGQVAAAKTIYAVSQGGAKDHVGSKIFSTEGVVPVLWEKLQKGLKTGNVVDSLLTGALKNLSSNTEGFWNSTIQAGGVDILMELLTKGHSSTLANVCFLLACMMIEDASVCSKVLTADATKQLLKLLGPGNDAPIRAEAAGALKYLSAQCKEARREIANFNGIPVLINATIAPSKEFMQGEYAQALQENAMCALANISGGLSYVISSLGQSLESCTSPTQIADTLGALASALMIYDNRAESTRASDPLVVEQTLLTQFKPRLPFLVQERTIEALASLYGNPILSIKLANSDAKRLLVGLITMASNEVQGELIKALLTLCNNEGSLWQALQGREGVQLLISLLGLSSEQQQECAVALLCLLSNENDESKWAITAAGGIPPLVQILETGSAKAKEDSATILRNLCNHSEDIRACVESADAVPALLWLLKNGSPNGKEIAAKTLNHLIHKSDTATISQLTALLTSDLPESKVYVLDALRSMLLVAPLSDILREGSAASDAVDTMIKIMSSTKEETQAMSASALAGIFEMRKDVRESSIAVKTLWSAMKLLNVEYDSILMESSRCMAAIFLSIKENREVAAIAKDALSPLVALANSSVLEVAEQATCAVANLILDSEISEKAVAEEVILPATRVLREGTFSGKALAAAAIARLLRSQKADYAVTDCVNHAGTVLALISFLDSAINGSISSSEALEALAVLSRSEETSGHIRPAWAVLAEFPKSISPIVLSIADSTPMLQDKAIEILSRLCGDQPVVLGETVVAASGCICSIAKRIISSRNVKVKIGGAALLICAAKVNHQRVVEDLNQSNLCADLVQSLVGMLVLGHPSLDDRGDDNKELISICRHAKEEENGGQSNAGTNIISDANLAIWLLSVLACHDEKSKIAIMEAGAIEVLTDRISECFSQYTQIDYKEDSSMWISALLLAILFQDRDIIRAHATMKSIPVLANLVKSEESANRYFAAQAIASLVCNGSRGTLLSVANSGAAGGLISLLGCADIDIQDLLELSEEFSLVHYPDQVALERLFRVDDIRVGATSRKAIPALVDLLKPIPDRPGAPFLALGLLTQLSLDCPSNKIVMVESGALEALTKYLSLGPQDATEEAATDLLGILFSSAEIRRHESAFGAVTQLVAVLRLGGRGARYSAAKALESLFSADHIRNAETARQAVQPLVEILNTGLEREQHAAIAALVRLLSENPSKALAVADVEMNAVDVLCRVLSSNCSMDLKGDAAELCCALFGNTRIRSTMAAARCVEPLVALLVTEFSPAQLSVVRALDRLVDDEQLAELVAAHGAVIPLVGLLYGRNYVLHEATSRALVKLGKDRPACKMEMVKAGVIESILDILHDAPDYLCAAFAELLRILTNNASIAKGPSAAKVVEPLFLLLTKQEFGPDGQHSALQVLVNILEHPQCRADYTLTSHQAIEPLVPLLDSPISAVQQLAAELLSHLLLEEHLQKDPLTQQVIGPLIRVLGSGIHILQQRAVKALVSLAPTWPNEIAKEGGVIEISKVILQADPSLPHALWESAASVLSSILQFSSEFYLEVPVAVLVRLLRSGSEGTVIGALNALLVLESDDGTSAEAMAESGAIEALLELLRSHRCEETAARLLEVLLNNVKIRETKATKSAILPLSQYLLDPQTQAQQARLLATLALGDLFQNESLARTTDAVSACRALVNVLEDQPTEEMKVVAICALQNLVMYSRSNKRAVAEAGGVQVVLDLIGSSDPETSVHAAMFIKLLFSNHTIQEYASSETVRAITASIEKDLWATGTVNDEYLKALNALFSNFPRLRATEPATLSIPHLVTSLKTGSEATQEAALDALFLLRQAWLACPAEVSRAQSIAAADAIPLLQYLIQSGPPRFQEKAEFLLQCLPGTLVVIIKRGNNMKQSVGNPSVYCKLTLGNTPPKQTKVVSTGPNPEWDESFSWSFESPPKGQKLHISCKNKSKVGKSSFGKVTIQIDRVVMLGAVAGEYTLLPESKSGPSRNLEIEFQWSNK 2235
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0863 2235 SMART C2_3c 2115 2211 IPR000008 -
Bisa02g0863 2235 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 620 662 IPR000225 GO:0005515
Bisa02g0863 2235 Pfam Armadillo/beta-catenin-like repeat 609 648 IPR000225 GO:0005515
Bisa02g0863 2235 CDD C2 2116 2206 - -
Bisa02g0863 2235 Gene3D - 1466 1604 IPR011989 -
Bisa02g0863 2235 Gene3D - 735 880 IPR011989 -
Bisa02g0863 2235 Pfam C2 domain 2114 2205 IPR000008 -
Bisa02g0863 2235 ProSiteProfiles C2 domain profile. 2095 2212 IPR000008 -
Bisa02g0863 2235 SUPERFAMILY ARM repeat 1664 2112 IPR016024 -
Bisa02g0863 2235 FunFam Coatomer beta subunit 1700 2113 - -
Bisa02g0863 2235 Gene3D C2 domain 2114 2235 IPR035892 -
Bisa02g0863 2235 SUPERFAMILY ARM repeat 743 1065 IPR016024 -
Bisa02g0863 2235 MobiDBLite consensus disorder prediction 103 124 - -
Bisa02g0863 2235 SUPERFAMILY ARM repeat 1023 1239 IPR016024 -
Bisa02g0863 2235 Gene3D - 133 493 IPR011989 -
Bisa02g0863 2235 Gene3D - 1614 2113 IPR011989 -
Bisa02g0863 2235 SMART arm_5 1482 1522 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1268 1311 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 178 219 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1941 1981 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1523 1563 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 651 691 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 566 607 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1898 1939 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 395 444 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1313 1354 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1395 1436 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 609 649 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 352 393 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1814 1853 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 817 855 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1565 1605 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 1650 1691 IPR000225 GO:0005515
Bisa02g0863 2235 SMART arm_5 220 260 IPR000225 GO:0005515
Bisa02g0863 2235 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 2113 2232 IPR035892 -
Bisa02g0863 2235 Gene3D - 885 1253 IPR011989 -
Bisa02g0863 2235 SUPERFAMILY ARM repeat 431 770 IPR016024 -
Bisa02g0863 2235 Gene3D - 496 734 IPR011989 -
Bisa02g0863 2235 SUPERFAMILY ARM repeat 154 475 IPR016024 -
Bisa02g0863 2235 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 1280 1324 IPR000225 GO:0005515
Bisa02g0863 2235 SUPERFAMILY ARM repeat 1277 1652 IPR016024 -
Bisa02g0863 2235 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 2114 2235 - -
Bisa02g0863 2235 PANTHER PROTEIN CELLULOSE SYNTHASE INTERACTIVE 1 113 2235 IPR044297 GO:0008017|GO:0010330|GO:0051211|GO:2001006
Bisa02g0863 2235 Gene3D - 1261 1465 IPR011989 -
Bisa02g0863 2235 FunFam Protein CELLULOSE SYNTHASE INTERACTIVE 1 1464 1698 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0863 Bisa-ChrBisa02 14613029 14624843 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0863 541 718 U-box Gene Family AT3G46510 29.348 6.27e-06 49.7