Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0843 ATGACTGTCACCGCGAAGTGGTGTGGTGGTGGGACCCACAGGATATCGGGGACGGACTACCTTGTGGGACCCACCAAGGGGGGCCCCTCCAATGGAGGTTTTTCTCCTCCCTCTCTACTCTACTATAAATCCAACCTCTTCTTTCCCTCTTCAATCCCACACCCCACGACAACAATCTCCTTCTTCTTCGCCGTCGCCTTCGTCTTCCTCTTCCTTCTTTCCTCATTCTCCATTCTCCCTTTTGCATTCCTTGCAAATCCCTTTAAACCCTTCCAGGAGAATGTGATTGTTACGGATGCAAATTCTGGATTCGACATGGCTATCACTGTGGCCGTATCGAACTCCTCCATTTTCCCGACGGCGGCGCAGAAACCGCCGGCCCCACCTGCAGGGTATATTTCCATTCCTAGGAGGAAAGTGTTGAAGAACCTTGAGATCAATGGAGAAGCCAGAATTAATGCCTGGGTTGACTCCATGAGAGCCTCTTCTCCCACCCATGTCAAATCCACTCCTTCTCTCGCCGAAGACCACAGCTCCTGGATTCTTAGCCACCCATCGGCATTAGACATGTTTGAGCAAATCATCGATGCCTCAAAAGGCAAGCAAATCGTTATGTTTCTGGACTACGATGGTACTCTCTCGCCTATCGTCGATGACCCTGACCGTGCCGTCATGCCCGATGCTATGAGAAAAACGGTGAGAAAACTCGCAAGGTGTTTTCCCACTGCCATAGTAAGCGGCAGATGCAGAGACAAGGTATACAGCTTTGTTCGGTTGGCAGAGCTGTATTATGCTGGAAGCCATGGCATGGATATCAAAGGCCCAACAAAATCCTCCAAATACAATAAAGACAGCAAAGCAGAGGCGGTTCTTTTTCAACCTGCTAGTGAGTTTCTTCCCATGATTGATGAGGTGTACCAAGTGTTGGTTGAGAAAACCAAATCAACTCCAGGAGCTAAGGTGGAAAACAACAAGTTCTGCGTCTCTGTTCATTATCGCTGTGTTGAGGAGAAGAAATGGAGTGAACTAGCACACCAAGTGAAATCGGTGCTGAAGGAGTACCCGAAGCTTCGTCTTACCCAAGGAAGGAAGGTATTTGAGATTCGTCCCACCATTAAATGGGACAAAGGGAGAGCCCTGGAATTTTTGTTAGAGTCACTTGGATTTGCCAATTGCGCTGATGTCTTTCCTGTCTATATTGGCGATGACCGAACCGACGAAGATGCATTTAAGAAATTGAGAGACAGAGGACAAGGTTTCGGCATTCTTGTGTCAAAATTTCCAAAAGACACTAGTGCATCTTACTCTTTGCAGGAACCCGATGAGGTGAAGGACTTTCTTCGACGTCTTGTGGAGTGGAAGCAAGTAACTCTGCGGTCACGCTCTCGGGTGTAA 1395 0.4832 MTVTAKWCGGGTHRISGTDYLVGPTKGGPSNGGFSPPSLLYYKSNLFFPSSIPHPTTTISFFFAVAFVFLFLLSSFSILPFAFLANPFKPFQENVIVTDANSGFDMAITVAVSNSSIFPTAAQKPPAPPAGYISIPRRKVLKNLEINGEARINAWVDSMRASSPTHVKSTPSLAEDHSSWILSHPSALDMFEQIIDASKGKQIVMFLDYDGTLSPIVDDPDRAVMPDAMRKTVRKLARCFPTAIVSGRCRDKVYSFVRLAELYYAGSHGMDIKGPTKSSKYNKDSKAEAVLFQPASEFLPMIDEVYQVLVEKTKSTPGAKVENNKFCVSVHYRCVEEKKWSELAHQVKSVLKEYPKLRLTQGRKVFEIRPTIKWDKGRALEFLLESLGFANCADVFPVYIGDDRTDEDAFKKLRDRGQGFGILVSKFPKDTSASYSLQEPDEVKDFLRRLVEWKQVTLRSRSRV 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0843 464 SUPERFAMILY HAD-like 204 453 IPR036412 -
Bisa02g0843 464 CDD HAD_TPP 204 443 - -
Bisa02g0843 464 FunFam Trehalose 6-phosphate phosphatase 203 290 - -
Bisa02g0843 464 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 119 458 IPR044651 GO:0004805|GO:0005992
Bisa02g0843 464 FunFam Trehalose 6-phosphate phosphatase 301 460 - -
Bisa02g0843 464 FunFam Trehalose 6-phosphate phosphatase 295 371 - -
Bisa02g0843 464 Gene3D - 203 304 IPR023214 -
Bisa02g0843 464 Gene3D - 308 462 IPR023214 -
Bisa02g0843 464 NCBIfam HAD-IIB family hydrolase 205 416 IPR006379 -
Bisa02g0843 464 NCBIfam trehalose-phosphatase 201 451 IPR003337 GO:0003824|GO:0005992
Bisa02g0843 464 Pfam Trehalose-phosphatase 206 440 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0843 Bisa-ChrBisa02 14286418 14288959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0843 191 413 Trehalose Biosynthesis Gene Families AT1G60140 25.862 2.57e-08 54.7