Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0828 ATGGCTGAAAGCAAGCGCTATGGTCTTGAAAACCAATTGGGCATTGAGCATATACTCTTGGAAGCACACCATCGATGGCTACGTCCAGCTGAAATTTGTGAAATTCTTCGTAATTTTAAGAAGTTTCATATTTCTCCAGAACCTGCAAATATGCCACCAAGTGGTTCACTTTTCCTATTTGATCGGAAGGTCCTGAGATACTTCAGAAAAGATGGCCACAACTGGAGGAAGAAAAAAGATGGAAAAACAGTGAAGGAAGCTCATGAAAGACTTAAGGATGGAAGTGTGGATGTGTTGCACTGCTACTATGCCCATGGAGAAGAAAATGGAAACTTACAAAGACGCAGTTACTGGATGCTAGAAGAGGAGCTCTCACACATTGTTCTTGTCCACTATCTGGAAGTGAAGGGTACTAGGGCAAATTTCAAATATGCGAAAGACAATGAAGAAGCTCTTCCTTATGCCCAACAAAATGATGAAACTACTATGCCCAGCTCAGAGATGGACGCTTCTATGCAGTCTAGCCATCATCCAAATAGTTACCAGGTTCCTTCACAAACTATGGATACAGCAAGCTTTAGCAGTGCTCAGGCATCAGAATATGAAGAAGCTGAATCTGCATTCAATAACCATGCAACTTCTCAGTTCTACTCTTTCTTCGAGCTGCAACAGCCCATTGTTGAAAAGACTAATGTTAAACTCCCTGATCCTCATCATCCTCTGCCAACTTTAAATGATCAAGGGAAGTTGTCAGGCTTTCCTGGGGTAGATTATATCTCACTTGACCAAGCTAATAAAACCAAAGACATTGATGCTGCCTCCTTAATGTATGAACCCCAAAAAAGCCTTGGCCTTTCGTCATGGGAAGATATCTTAACAAATAATGCTGGAAGTCAACCAGTAACTTTTCATCACAGATTGCCTAAAATACAACCGAATACAATGGGAATCAATAGTAATTCATCTCAAGGAGATGAGCTAATGCGGCAACCTTTTATGAGCAGAACAGCTAAACAGTATGAGAATTGGAATCTCATACAAGCTCAAGAAAATTGGCAGGCTTCTGGTTGCAATTCTTCATGCTTACCCAGTTGGCCTGCAGATAGTGTGCACCCAGGCTCAGTCTCTGAGGTTAGTTCTAGGCACCATGATCAAGACTTTCAAAAGTCCTTGGAGAAGCACCTTGTACATCCAGACAAGCAAAACAGGTGTCTTGGGAAAAATGATCCACAAGATAAGCTTTTGAGTGAAAAAGACAACAATAAAGTCAAATCAGATCTACAGACAAGTATGAGTCTGGATGAAATAGATGACAACACTTATTTCACTTTAAAGCAAACTCTCCTAGATGGACCTGCTACAGAAGAGGGTCTGAAAAAGCTTGACAGTTTCAACCAATGGATGAGTAAAGAACTTGGAGATGTAGATGAACTAAATATACAATCTACTTCTGGTGCATACTGGGATACGGTTGAAAGCCAAAATGGGGTTGACAGTCCAAACTTTTCTCCCCATGTGCACTTGGGCACCGATCATCTGGACCCATCTATTTCCCATTGTCAACTTTTTAGCATTGTTGACTATTCACCTAGCTGGACATATGAAAACTTAAAAACTAAGGTCCTTATTTCTGGAAAATTCTTAAGGAGTCCACAAGAAGCAGAAAATTGTAAATGGTCATGTATGTTTGGTAAGGTAGAAGTACCTGCAGAGATCATCAGCCATGGCGTTCTTCGTTGTCATACTCCTCTGCACAAGGTTGGGAGGGTTCCTTTCTATGTAACATGTTCTAATAGGTTAGCATGTAGTGAAGTGCGAGAATTTGATTTCCGAGTCAACCATATTCAAGAAGTCAAAACTGCAGATAAGAGCAGAGGCAGCATTTTTGAAGTACTTAATAAGCGATTTGGAGAATTATTGTCTTTGGGGTCTTCCTCTAAACATTTAGAATCCATTAGTGTAAGTGAGAAATTTCAGCTGGGAAGTAAAATCAGTTCTTTGCTGAGAGAGGAGAATGACAAATGGGACAAATTACTGAAACTTACTTCAGAGAGAGATTTTTCTCTAGAAGATGTACATGAGCAGCTACTTCAAAAGCTTCTGAAAGAAAAGTTGCTGGCTTGGCTCCTTCAGAAAATCACTGAAGATGGGAAAGGTCCTAATGTATTAGATGAAGGCGGCCAAGGTGTGCTTCATCTTGCAGCTGCTCTTGGCTATGATTGGGCCCTTCAACCAACGATAGTTTCAGGTGTGAACATTAACTTTCGTGACGTAAATGGATTGACTGCTCTTCATTGGGCAGCATTTTGTGGCAGGGAGCGTACAGTTGCTTCCCTCATCTCTCTTGGTGCTGCCCCTGGAGCCCTGACTGATCCATGCCCGAAATATCCTACTGGTAGAACCCCTGCTGACCTAGCTTCTGCAAATGGACACAAAGGGATTGCTGGGTATCTTGCAGAATCAGCCCTGAGTGCGCACCTAAGATCTCTTAATTTGAGTAGGGAAGGTGGTGCTAAAGAAAATTTTGGGGCGAGAGAAGTACAAAGAATTGGAGAGCAAAATAAAAATACAGTTAATGATGGAGACATATCATGTGAACTGTCATTGAAAAATTCACTGGCTGCGGTTTGTAATGCCACCCAAGCTGCTGCCCGTATTCATCAAGTTTACAGAGTGCAGTCATTCCAGAGAAAACAATTGAAAGAATATGGTGATGATAAATTTGGATTATCCAATGAACAAGCTCTTTCACTTATAACAGTCAAATCACACAAGGCTGGACAGCATGATGATCCTGTCCATGCTGCTGCAATACAAATCCAGAAGAAGTTCCGTAGTTGGAAGGGCAGAAAAGATTTTTTGATAATTCGGCAGCGAATAGTGAAAATTCAGGCTCATGTAAGAGGTCATCAGGTTAGGAAAAACCATAGAAAAATAATATGGTCTGTTGGAATTGTGGAGAAGGTTATTTTACGTTGGCGTCGAAAAGGCAGTGGTTTACGTGGATTTAAATCAGAAGCCATTAGTGACGGCAGTATGGTACAAGATATGCCTTTCAAGGAGGATGACTATGATTTCCTTAAAGAAGGCAGGAAGCAAACAGAGGAAAGGATGCAGAAAGCGCTAGCCAGGGTGAAGTCAATGGTTCAGTATCCAGAGGCAAGAGATCAATACCATAGGCTGTTGAATGTTGTAAATGAGGTTCATGAAACTCAGGTAAAATATGATAGGAGTTTAAACAATTCAGAAGAAACAATCGAATGTGCCCTCATTGATCATGAAGCTTTGTTGGATGAAAATGTATATATGCCTGCAGCTTAA 3321 0.4107 MAESKRYGLENQLGIEHILLEAHHRWLRPAEICEILRNFKKFHISPEPANMPPSGSLFLFDRKVLRYFRKDGHNWRKKKDGKTVKEAHERLKDGSVDVLHCYYAHGEENGNLQRRSYWMLEEELSHIVLVHYLEVKGTRANFKYAKDNEEALPYAQQNDETTMPSSEMDASMQSSHHPNSYQVPSQTMDTASFSSAQASEYEEAESAFNNHATSQFYSFFELQQPIVEKTNVKLPDPHHPLPTLNDQGKLSGFPGVDYISLDQANKTKDIDAASLMYEPQKSLGLSSWEDILTNNAGSQPVTFHHRLPKIQPNTMGINSNSSQGDELMRQPFMSRTAKQYENWNLIQAQENWQASGCNSSCLPSWPADSVHPGSVSEVSSRHHDQDFQKSLEKHLVHPDKQNRCLGKNDPQDKLLSEKDNNKVKSDLQTSMSLDEIDDNTYFTLKQTLLDGPATEEGLKKLDSFNQWMSKELGDVDELNIQSTSGAYWDTVESQNGVDSPNFSPHVHLGTDHLDPSISHCQLFSIVDYSPSWTYENLKTKVLISGKFLRSPQEAENCKWSCMFGKVEVPAEIISHGVLRCHTPLHKVGRVPFYVTCSNRLACSEVREFDFRVNHIQEVKTADKSRGSIFEVLNKRFGELLSLGSSSKHLESISVSEKFQLGSKISSLLREENDKWDKLLKLTSERDFSLEDVHEQLLQKLLKEKLLAWLLQKITEDGKGPNVLDEGGQGVLHLAAALGYDWALQPTIVSGVNINFRDVNGLTALHWAAFCGRERTVASLISLGAAPGALTDPCPKYPTGRTPADLASANGHKGIAGYLAESALSAHLRSLNLSREGGAKENFGAREVQRIGEQNKNTVNDGDISCELSLKNSLAAVCNATQAAARIHQVYRVQSFQRKQLKEYGDDKFGLSNEQALSLITVKSHKAGQHDDPVHAAAIQIQKKFRSWKGRKDFLIIRQRIVKIQAHVRGHQVRKNHRKIIWSVGIVEKVILRWRRKGSGLRGFKSEAISDGSMVQDMPFKEDDYDFLKEGRKQTEERMQKALARVKSMVQYPEARDQYHRLLNVVNEVHETQVKYDRSLNNSEETIECALIDHEALLDENVYMPAA 1106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0828 1106 MobiDBLite consensus disorder prediction 377 424 - -
Bisa02g0828 1106 Pfam IPT/TIG domain 525 599 IPR002909 -
Bisa02g0828 1106 FunFam Calmodulin-binding transcription activator 2 518 614 - -
Bisa02g0828 1106 SMART CG_1_2 18 136 IPR005559 GO:0003677
Bisa02g0828 1106 FunFam Calmodulin-binding transcription activator 2 932 980 - -
Bisa02g0828 1106 PANTHER CALMODULIN-BINDING TRANSCRIPTION ACTIVATOR CAMTA 15 1071 - -
Bisa02g0828 1106 ProSiteProfiles IQ motif profile. 956 980 IPR000048 GO:0005515
Bisa02g0828 1106 SMART ANK_2a 759 788 IPR002110 GO:0005515
Bisa02g0828 1106 SMART ANK_2a 798 827 IPR002110 GO:0005515
Bisa02g0828 1106 Pfam IQ calmodulin-binding motif 934 953 IPR000048 GO:0005515
Bisa02g0828 1106 Pfam IQ calmodulin-binding motif 958 977 IPR000048 GO:0005515
Bisa02g0828 1106 Gene3D - 686 831 IPR036770 -
Bisa02g0828 1106 Gene3D - 931 980 - -
Bisa02g0828 1106 ProSiteProfiles CG-1 DNA-binding domain profile. 15 141 IPR005559 GO:0003677
Bisa02g0828 1106 SMART iq_5 955 977 IPR000048 GO:0005515
Bisa02g0828 1106 SMART iq_5 932 954 IPR000048 GO:0005515
Bisa02g0828 1106 SUPERFAMILY Ankyrin repeat 713 820 IPR036770 -
Bisa02g0828 1106 MobiDBLite consensus disorder prediction 151 186 - -
Bisa02g0828 1106 Pfam Ankyrin repeats (3 copies) 731 822 IPR002110 GO:0005515
Bisa02g0828 1106 SUPERFAMILY E set domains 525 610 IPR014756 -
Bisa02g0828 1106 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 923 983 IPR027417 -
Bisa02g0828 1106 Coils Coil 1024 1044 - -
Bisa02g0828 1106 ProSiteProfiles Ankyrin repeat region circular profile. 759 784 - -
Bisa02g0828 1106 Gene3D Immunoglobulins 518 614 IPR013783 -
Bisa02g0828 1106 MobiDBLite consensus disorder prediction 154 186 - -
Bisa02g0828 1106 MobiDBLite consensus disorder prediction 368 425 - -
Bisa02g0828 1106 Pfam CG-1 domain 21 134 IPR005559 GO:0003677
Bisa02g0828 1106 ProSiteProfiles Ankyrin repeat profile. 759 791 IPR002110 GO:0005515
Bisa02g0828 1106 ProSiteProfiles IQ motif profile. 934 962 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0828 Bisa-ChrBisa02 14033491 14050422 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0828 1 1084 CAMTA Transcription Factor Family AT5G64220 46.673 0.0 899
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF CAMTA Bisa02g0828 Ank_2 9.1e-07 CL0465