Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0820 ATGGGTTCGTCTCGAACTTCTCATCGTCGCAAGGGATCGAGGTTGATAGTTAGAGCAGAGACAGATTACTATTCTGTCCTTGGGGTGTCAAGAAATGCTAGCAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGAAATTATCATCCAGATGTGAACAAAGATCCTGGCGCAGAAGCGAAGTTTAAGGAAATTAGCAATGCATATGAAGTATTATCAGATGATGAGAAGCGATCTATATATGACAGATATGGAGAGGCTGGACTTAAAGGTTCTGGAATGGGCATGGGGGATTTCAGTAATCCATTTGACCTATTTGAGACACTGTTTGAGGGCATGAATCGTGGCACAAGCAGCAGAGGTTCTTGGAATGGTGCAATTGATGGTGAAGATGAGTATTATAGTCTTATCTTGAACTTTAAGGAAGCAGTTTTTGGAGTAGAAAAAGAGATAGAGATAAGCCGACTAGAGAGCTGTGGAACTTGCAATGGTTCAGGGGCTAAACCAGGAACTAAGCCAACCAGATGTAGCGCTTGTGGGGGTCAAGGTAGGGTTGTCTCATCAACAAGGACACCATTAGGTATTTTCCAGCAGTCAATGACATGCTCTTCATGCAATGGGACTGGAGAAATTTTGACACCTTGCAACACGTGTTCTGGGGATGGTCGAGTGAGGCGAACCAAGCGGATAAGTCTGAAAGTCCCAGCAGGTGTGGACTATGGTAGCCGCTTAAGGGTCCGAAATGAAGGGAATGCTGGAAGGCGAGGTGGTTCTCCTGGTGACCTCTTTGTTGTTATTGAAGTTATCCCTGATCCTGTTCTTAAACGTGATGACACCAACATTTTATACACTTGTAAGGTGTCCTACATAGACGCAATTTTGGGGACCACAATCAAGGTCCCTACTGTAGATGGCATGGTGGATTTAAAAATCCCTGCTGGGACCCAACCGAATACAACACTTGTTATGGCTAGAAAAGGTGTTCCCCTGCTGAATAAGAGCAATATGAGGGGTGATCAGTTGGTTCGGGTACAAGTTGAAATCCCCAAAAGATTGAGCAGCGATGAGAGGAAGCTTATTGAAGAACTTGCTGATTTAAGCAAAGGCAAGACTGCAACCAGTAAGAGATAA 1134 0.4436 MGSSRTSHRRKGSRLIVRAETDYYSVLGVSRNASKSEIKSAYRKLARNYHPDVNKDPGAEAKFKEISNAYEVLSDDEKRSIYDRYGEAGLKGSGMGMGDFSNPFDLFETLFEGMNRGTSSRGSWNGAIDGEDEYYSLILNFKEAVFGVEKEIEISRLESCGTCNGSGAKPGTKPTRCSACGGQGRVVSSTRTPLGIFQQSMTCSSCNGTGEILTPCNTCSGDGRVRRTKRISLKVPAGVDYGSRLRVRNEGNAGRRGGSPGDLFVVIEVIPDPVLKRDDTNILYTCKVSYIDAILGTTIKVPTVDGMVDLKIPAGTQPNTTLVMARKGVPLLNKSNMRGDQLVRVQVEIPKRLSSDERKLIEELADLSKGKTATSKR 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0820 377 SUPERFAMILY HSP40/DnaJ peptide-binding domain 128 281 IPR008971 GO:0006457|GO:0051082
Bisa02g0820 377 Pfam DnaJ domain 22 83 IPR001623 -
Bisa02g0820 377 Hamap Chaperone protein DnaJ [dnaJ]. 19 373 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bisa02g0820 377 NCBIfam molecular chaperone DnaJ 22 366 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Bisa02g0820 377 ProSitePatterns Nt-dnaJ domain signature. 63 82 IPR018253 -
Bisa02g0820 377 PRINTS DnaJ domain signature 24 42 IPR001623 -
Bisa02g0820 377 PRINTS DnaJ domain signature 58 78 IPR001623 -
Bisa02g0820 377 PRINTS DnaJ domain signature 42 57 IPR001623 -
Bisa02g0820 377 PRINTS DnaJ domain signature 78 97 IPR001623 -
Bisa02g0820 377 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 8 375 - -
Bisa02g0820 377 Pfam DnaJ C terminal domain 135 350 IPR002939 -
Bisa02g0820 377 Gene3D - 160 223 - -
Bisa02g0820 377 SUPERFAMILY HSP40/DnaJ peptide-binding domain 275 361 IPR008971 GO:0006457|GO:0051082
Bisa02g0820 377 CDD DnaJ_C 131 353 - -
Bisa02g0820 377 CDD DnaJ 22 75 IPR001623 -
Bisa02g0820 377 Gene3D DnaJ domain 19 123 IPR036869 -
Bisa02g0820 377 Gene3D - 270 377 - -
Bisa02g0820 377 FunFam Chaperone protein dnaJ A6 chloroplastic 19 122 - -
Bisa02g0820 377 FunFam Putative Mitochondrial DnaJ chaperone 216 265 - -
Bisa02g0820 377 FunFam Molecular chaperone DnaJ 152 228 - -
Bisa02g0820 377 CDD DnaJ_zf 160 223 IPR001305 GO:0031072|GO:0051082
Bisa02g0820 377 ProSiteProfiles dnaJ domain profile. 22 86 IPR001623 -
Bisa02g0820 377 Pfam DnaJ central domain 160 223 IPR001305 GO:0031072|GO:0051082
Bisa02g0820 377 FunFam Chaperone protein dnaJ 1, mitochondrial 270 377 - -
Bisa02g0820 377 SUPERFAMILY Chaperone J-domain 18 114 IPR036869 -
Bisa02g0820 377 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 147 226 IPR036410 -
Bisa02g0820 377 Gene3D - 130 265 - -
Bisa02g0820 377 ProSiteProfiles Zinc finger CR-type profile. 147 228 IPR001305 GO:0031072|GO:0051082
Bisa02g0820 377 SMART dnaj_3 21 78 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0820 Bisa-ChrBisa02 13840003 13843971 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0820 23 85 C2H2 Transcription Factor Family AT1G74250 46.377 3.10e-10 59.7