Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0816 ATGTTATTCATATTGGGCCGCTTTGACAAGTTTGAGAACCGTTTTTGCGAAGGAGAGATAGATAGAGTCCGAACTGAAACGGGGATGGAGGAGGAAGAGCACGAGGTGTACGGAGGTGAGATCCCAGATGTTGGCGAGATGGAAGGGGACATGGACCCTCACAATGCCGACGTCGACATGTCAGCTGCCGACGATGAAGCCGTGAAGGAGCTGGACGAGATGAAGAAGCGATTGAAGGAGATGGAAGAGGAGGCTGCAGCTCTCCGTGAGATGCAGGCCAAGGTCGAGAAGGAAATGGGCGCTGTTCAAGATCCTGCTAGTGCAGCTGCTTCTCAGGCAAACAAGGAGGAGGCAGATGCTCGATCTGTTTTTGTTGGCAATGTTGATTACGCATGCACCCCAGAAGAAGTGCAGCAACACTTTCAGTCATGTGGTACGGTGAACAGGGTCACTATATTGACAGACAAGTATGGCCAACCTAAGGGTTTTGCTTATGTGGAATTCCTTGAAAACGAAGCTGTTCAAGAGGCACTTCTCTTGAATGAGTCTGAACTGCATGGCCGTCAGCTGAAGGTTTTGCCTAAGAGGACCAATGTTCCCGGAATGAAACAGTATCGTCCTAGGCGTTTCAGTCCTCACCTGGCATACCGCTTCAGGAGGCCATATCCTCCTCCTTACTTTTACTCCCCTTATGGATATGGGAAGTTCCCTAGGTTTCGAAGGCCAGGTCGGTACACGCCTTACTATTAG 750 0.5027 MLFILGRFDKFENRFCEGEIDRVRTETGMEEEEHEVYGGEIPDVGEMEGDMDPHNADVDMSAADDEAVKELDEMKKRLKEMEEEAAALREMQAKVEKEMGAVQDPASAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKYGQPKGFAYVEFLENEAVQEALLLNESELHGRQLKVLPKRTNVPGMKQYRPRRFSPHLAYRFRRPYPPPYFYSPYGYGKFPRFRRPGRYTPYY 249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0816 249 Gene3D - 49 204 IPR012677 -
Bisa02g0816 249 CDD RRM_II_PABPs 122 193 - -
Bisa02g0816 249 SUPERFAMILY RNA-binding domain, RBD 111 216 IPR035979 GO:0003676
Bisa02g0816 249 Coils Coil 64 98 - -
Bisa02g0816 249 SMART rrm1_1 122 193 IPR000504 GO:0003723
Bisa02g0816 249 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 4B/4H 48 206 - -
Bisa02g0816 249 FunFam Polyadenylate-binding protein 1 60 193 - -
Bisa02g0816 249 Pfam RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 123 191 IPR000504 GO:0003723
Bisa02g0816 249 ProSiteProfiles Eukaryotic RNA Recognition Motif (RRM) profile. 121 197 IPR000504 GO:0003723
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0816 Bisa-ChrBisa02 13795464 13801091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0816 118 192 Eukaryotic Initiation Factors Gene Family AT2G36660 34.211 3.01e-09 55.1