Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0802 ATGAAGGGACTCGGCAGCTCAGATTCCCTGGGTGGTCTCATGACCATCTGTCCCTCCACAGAGGAACACAGTCCGAGGAACAGCAATCGCGTGTATGGTCGGGAGTTCCAATCCATGTTGGACGGACTCGATGAGGAAGGTTGCGTCGAGGAATTAGGCCATCCCGCCGAGAAGAAACGCCGTCTAAGCGTGGATCAGGTCAAGGCCTTAGAGAAGAATTTCGAGGTGGAAAACAAGCTCGAGCCCGAGAGGAAGGTCAAGCTCGCTCAAGAACTCGGATTGCAGCCCCGTCAAGTCGCCGTCTGGTTCCAAAACCGTCGCGCTAGATGGAAAACCAAGCAATTGGAGAGAGATTACGGCGTTCTTAAAGCCAATTACGACTCTCTCAAACTCAATTTCGATTCCCTCCAACAAGACAACGAAGCTTTGCTCAAAGAGATTAAGGAATTGAAATCGAGATTACAAGAAGAGAATAGCGAAGATGTTGTTGTATCAGTGAAGGAAGAAATAACGCAGCCTGACCCGTTGGAGGAGAAAGTAGTGATGGGAGTGGTGGGCGTGACGGCGCCTCCGGAGACCGCCATTCCCGGAGCAGAGTCGGAGGACTTAAATTACGAGTGCCTTAATAGAAACGACGTCGTGGGAGGCGCGTCGCTGTTCCCTGCAGACTTCAACAGAGACGGCGCTTCAGACAGCGACTCGAGCGCGATCTTGAACGAAGACAATAACAGCCCAAAGGGCGCCGTTTCATCGCTTCAAAGTCACCAGCTCGCGATGTCGTCGTTTCAAACTCAATACGTTAAAATGGAGGAGCATAATTTCTTCAGCACAGACGAGGCCTGCAATTTCTTCTCGGACGAACAGGCACCGACTCTCCAGTGGTACTGGAGTTAA 894 0.5157 MKGLGSSDSLGGLMTICPSTEEHSPRNSNRVYGREFQSMLDGLDEEGCVEELGHPAEKKRRLSVDQVKALEKNFEVENKLEPERKVKLAQELGLQPRQVAVWFQNRRARWKTKQLERDYGVLKANYDSLKLNFDSLQQDNEALLKEIKELKSRLQEENSEDVVVSVKEEITQPDPLEEKVVMGVVGVTAPPETAIPGAESEDLNYECLNRNDVVGGASLFPADFNRDGASDSDSSAILNEDNNSPKGAVSSLQSHQLAMSSFQTQYVKMEEHNFFSTDEACNFFSDEQAPTLQWYWS 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0802 297 ProSiteProfiles 'Homeobox' domain profile. 53 113 IPR001356 GO:0003677
Bisa02g0802 297 SUPERFAMILY Homeodomain-like 43 115 IPR009057 -
Bisa02g0802 297 SMART HOX_1 56 117 IPR001356 GO:0003677
Bisa02g0802 297 Pfam Homeodomain 58 111 IPR001356 GO:0003677
Bisa02g0802 297 ProSitePatterns 'Homeobox' domain signature. 88 111 IPR017970 GO:0000981|GO:0006355
Bisa02g0802 297 MobiDBLite consensus disorder prediction 230 252 - -
Bisa02g0802 297 Pfam Homeobox associated leucine zipper 113 155 IPR003106 GO:0006355|GO:0043565
Bisa02g0802 297 Coils Coil 126 160 - -
Bisa02g0802 297 CDD homeodomain 58 114 IPR001356 GO:0003677
Bisa02g0802 297 PRINTS Lambda-repressor HTH signature 84 93 IPR000047 GO:0003677
Bisa02g0802 297 PRINTS Lambda-repressor HTH signature 93 109 IPR000047 GO:0003677
Bisa02g0802 297 MobiDBLite consensus disorder prediction 1 31 - -
Bisa02g0802 297 FunFam Homeobox-leucine zipper protein HAT5 51 115 - -
Bisa02g0802 297 Gene3D - 53 120 - -
Bisa02g0802 297 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN 50 296 IPR045224 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0802 Bisa-ChrBisa02 13529017 13530283 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0802 1 295 Homeobox Transcription Factor Family AT4G40060 47.883 3.78e-79 240
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Bisa02g0802 Homeodomain 2.4e-16 CL0123