Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g0792 | ATGGGCTTGTCGAACTTCCCGAGTGCGGCGGAGGGAGTGCTTCCGGTGCTGGTGATGAACACCGTGATGTCCGTGGCTCTGTTGAAGAACATCTTTAGATCGATTCTTCAATTGGGTGGTGCCATTTCCAATTCTACTTCCGCTTCCGCGTATTCGTCGAACTCAATCGTGGAGGCGGACTCCGATGATGAAATCAGTTCGATTGGGAGAAGGAGGGTCTCTGTGACGCAGTACAGGTCGATGAGTCGGAGAGGGTGGGAGATGGTGGAGTGTTGCGTTTGTCTGTGCGGCTTCCAAGGGAGTGAGGAGGTGAGCGAGTTGTCGTGCAAGCATTTCTTCCACAAGGCTTGCTTGGATAAGTGGTTTCACAACAGACACCCTACTTGCCCTCTCTGTCGTTCCGCGGATTAG | 411 | 0.5328 | MGLSNFPSAAEGVLPVLVMNTVMSVALLKNIFRSILQLGGAISNSTSASAYSSNSIVEADSDDEISSIGRRRVSVTQYRSMSRRGWEMVECCVCLCGFQGSEEVSELSCKHFFHKACLDKWFHNRHPTCPLCRSAD | 136 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0792 | 136 | SUPERFAMILY | RING/U-box | 90 | 134 | - | - | |
| Bisa02g0792 | 136 | CDD | RING-H2 | 91 | 133 | - | - | |
| Bisa02g0792 | 136 | SMART | ring_2 | 91 | 132 | IPR001841 | - | |
| Bisa02g0792 | 136 | PANTHER | - | 1 | 134 | IPR044249 | - | |
| Bisa02g0792 | 136 | ProSiteProfiles | Zinc finger RING-type profile. | 91 | 133 | IPR001841 | - | |
| Bisa02g0792 | 136 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 48 | 136 | IPR013083 | - | |
| Bisa02g0792 | 136 | Pfam | Ring finger domain | 90 | 133 | IPR001841 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g0792 | Bisa-ChrBisa02 | 13399175 | 13399585 | Dispersed/Wgd |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0792 | 1 | 135 | C3H Transcription Factor Family | AT2G04240 | 34.694 | 1.91e-21 | 82.8 |