Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Bisa02g0785 | ATGTGGGGAGAAGAGGGTAAGGACCGGCCCGCCGGCGGCGGCCGGAGAACGTATTCACGTTCTGTTTCTTGGACTGATCGGTCTCCGTCGAAGACTAGCCCAAACCGCAGGCCACCCACAAACAGTAAGCCTCGTCCATTACTGCCTCCTCTTCAGCCTCTCTCCATCACAAAACGCAGTGCTGAGGAGTGGCCTAGTGCGGGATCTGATGATCTTGGAATTTGGCCTCTTCCGCAAACCCCAAGAGGGTCGATCAAAGCCCTGGAGAGCTCTGATTCGGGTCAACCCGCGAAAGAATTTCAGTTCAAGAGGGATAAATTAGCCTTCTTTGACAAGGAGTGTTCCAGAATCGCGGAGCATATATATTTGGGAAGTGATACAGTGGCGAAAAATCACGAGCTTTTGAGGCAAAATGGGATCACTCATGTGCTCAACTGTGTTGGGTTTGTTTGCGCTGAGTATTTCAAAAGCGACTTTGTGTACAAGACACTCTGGTTACAGGACAGCCCCACCGAGGATATCACCAGTATTCTCTACGATGTCTTCGATTACTTTGAGGATGTTCGGGAGCAAGGTGGGCGTGTCCTCGTGCATTGTTGTCAGGGGGTTTCTCGATCATCCTCTCTGGTCATTGCATATCTCATGTGGAGGGAAGGTCAAAGCTTCGAAGATGCGTTTCAGTATGTGAAGACTGCAAGAGGAGTCACGAACCCAAACATGGGTTTTGCTTGTCAACTTCTGCAGTGTCAGAAACGTGTACATGCTATGCCTGCGAGTCCTAATTCCATTCGTAGGATGTATCGAATGGCCCCTCATTCCCCTTATGATCCTCTTCACTTGGTCCCCAAAATGATAGACCAACCAGGTGCGCGAGCTCTTGATTCTCGTGGGGCTTTCGTTATACATGTTCCTTCTGCTATATATGTGTGGACTGGAAAAAATTGTAGTTCAATTATGTCACGTAATGCAAGGGAAGCAGCAGATCAGGTGATCCGCTATGAGGGGGCAAAAGGTCCGATTTTCAGCATTAATGAAGGTGAAGAGCCTTTGGAGTTTTGGATTGCTCTTGCCAACGAGCAGCTCTTATCAGGTGATGCAAGCATGGAGGTTACTGAATCAGGTAGTGTGGAGATTGGTGGGAGAAAAGTTAGTGATTATGATTTGGATTTTGAAATTTTCCACAAAGCTCGTGCTGGTGGAGTTGTTCCTCCCTTTTCAGTTTCTAGTGCAGAATCAGAAACTTGTTTGCCTGCTAGAGAAAACGGTTGGGGAAGACTGAGGAGGAAGCTTGCTAGTGGTATCATGAAAGGGTTGTTCACATCGTCCTCTAAATGGAACTCTGAAGCTACCACCACCAAATCTATGGATGAACCGAGTGTAATGATGGAAGAAGAAAACCAAGATTCTGTGGTTGATCCTAATTTGTCACCATCATCATCAATCCATCCCTGTGGTTCACCTGACTCTTTTGAATGTTTTCCAGATAACAGCTCAGACAGGGCAAAGGATATGGCAGTCACATCAGATTCTTTTTCCTGTTTTATGAGAAGCAGCCCAAAATTCAGTTCAAAGTCTCCAACACTCTCACCTTCCAGTTCTGATTATGCCAGTTCATTTACATTTTCACCTTCGTCTACAAATTGGTCTGACTTGTCATTAGTATCTTCTAGGCAGCCATCACCTTCTAGCCTGGAACCAACTGAACCTTTTTATGTCAAAGATCTATCTTTCTCAGAAAACTCCCCTTTACTTCACAAAGAAGATGTTTCTTCGCCTAAGGAAGAGGCATATTCTGCTAATCGCAATTTGCCATGTAAAGGGTCTTCCCCCTCCATTGCAGAGCGCAGAGGGAGTAATCCTCCACCTCGTATGGTGCTACCCTCTGTCAACGAATCACCTCACGACCACACCAACCTGGTAAGATCACAGTCATTTTCTCTACCTGACTTAGATGATAACATGATGGAGGATTTTACTTGCACGCAATCCGGTCATGAAAACAATGCAAAAGGGCTATTACAAGATGCTAACATCAGTTCAGGTGGTGAGTCGCAGGGTAAGAATAATGACGACAACGAGGATCACATGGTACTGTGTTATGTGATATAA | 2109 | 0.4599 | MWGEEGKDRPAGGGRRTYSRSVSWTDRSPSKTSPNRRPPTNSKPRPLLPPLQPLSITKRSAEEWPSAGSDDLGIWPLPQTPRGSIKALESSDSGQPAKEFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQNGITHVLNCVGFVCAEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSSSLVIAYLMWREGQSFEDAFQYVKTARGVTNPNMGFACQLLQCQKRVHAMPASPNSIRRMYRMAPHSPYDPLHLVPKMIDQPGARALDSRGAFVIHVPSAIYVWTGKNCSSIMSRNAREAADQVIRYEGAKGPIFSINEGEEPLEFWIALANEQLLSGDASMEVTESGSVEIGGRKVSDYDLDFEIFHKARAGGVVPPFSVSSAESETCLPARENGWGRLRRKLASGIMKGLFTSSSKWNSEATTTKSMDEPSVMMEEENQDSVVDPNLSPSSSIHPCGSPDSFECFPDNSSDRAKDMAVTSDSFSCFMRSSPKFSSKSPTLSPSSSDYASSFTFSPSSTNWSDLSLVSSRQPSPSSLEPTEPFYVKDLSFSENSPLLHKEDVSSPKEEAYSANRNLPCKGSSPSIAERRGSNPPPRMVLPSVNESPHDHTNLVRSQSFSLPDLDDNMMEDFTCTQSGHENNAKGLLQDANISSGGESQGKNNDDNEDHMVLCYVI | 702 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0785 | 702 | SMART | VILL_6 | 265 | 359 | IPR007122 | GO:0051015 | |
| Bisa02g0785 | 702 | MobiDBLite | consensus disorder prediction | 516 | 567 | - | - | |
| Bisa02g0785 | 702 | SMART | dsp_5 | 113 | 252 | IPR020422 | GO:0006470|GO:0008138 | |
| Bisa02g0785 | 702 | SUPERFAMILY | Actin depolymerizing proteins | 259 | 358 | - | - | |
| Bisa02g0785 | 702 | MobiDBLite | consensus disorder prediction | 446 | 483 | - | - | |
| Bisa02g0785 | 702 | ProSiteProfiles | Tyrosine specific protein phosphatases domain profile. | 172 | 233 | IPR000387 | GO:0016311|GO:0016791 | |
| Bisa02g0785 | 702 | MobiDBLite | consensus disorder prediction | 1 | 76 | - | - | |
| Bisa02g0785 | 702 | MobiDBLite | consensus disorder prediction | 516 | 565 | - | - | |
| Bisa02g0785 | 702 | MobiDBLite | consensus disorder prediction | 675 | 694 | - | - | |
| Bisa02g0785 | 702 | MobiDBLite | consensus disorder prediction | 584 | 621 | - | - | |
| Bisa02g0785 | 702 | SUPERFAMILY | (Phosphotyrosine protein) phosphatases II | 105 | 255 | IPR029021 | - | |
| Bisa02g0785 | 702 | Gene3D | Protein tyrosine phosphatase superfamily | 88 | 255 | IPR029021 | - | |
| Bisa02g0785 | 702 | PANTHER | MKPA PROTEIN | 12 | 647 | - | - | |
| Bisa02g0785 | 702 | MobiDBLite | consensus disorder prediction | 469 | 483 | - | - | |
| Bisa02g0785 | 702 | ProSitePatterns | Tyrosine specific protein phosphatases active site. | 197 | 207 | IPR016130 | GO:0016311|GO:0016791 | |
| Bisa02g0785 | 702 | ProSiteProfiles | Dual specificity protein phosphatase domain profile. | 113 | 255 | IPR020422 | GO:0006470|GO:0008138 | |
| Bisa02g0785 | 702 | MobiDBLite | consensus disorder prediction | 18 | 38 | - | - | |
| Bisa02g0785 | 702 | Pfam | Dual specificity phosphatase, catalytic domain | 121 | 251 | IPR000340 | GO:0008138|GO:0016311 | |
| Bisa02g0785 | 702 | Gene3D | Severin | 266 | 362 | IPR029006 | - | |
| Bisa02g0785 | 702 | CDD | DSP | 114 | 248 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Bisa02g0785 | Bisa-ChrBisa02 | 13324191 | 13326299 | Dispersed/Transposed |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Bisa02g0785 | 1 | 149 | Protein tyrosine phosphatase (PTP) family | AT3G55270 | 42.703 | 3.57e-33 | 134 |