Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0772 ATGGAAAACGTAGGAGGTTGTTGTTCATCCTCGAACAATGAGGGTGGGGGCATGAAGGAGCAAGAGCGATTGTTGCCAATAGCGAATGTTGGTCGGATCATGAAGCAAATACTGCCTCAGAATGCGAAGATCTCCAAGGAAGCGAAGGAGATGATGCAGGAATGTGTGTCAGAGTTCATAAGCTTTGTGACCAGCGAGGCCTCAGATAAGTGCAGGAAAGAGAGGAGGAAGACGTTGAATGGCGATGACATATGCTGGGCTTTGGGAACACTCGGCTTTGATGACTATTCTCATCCTCTCACAAGGTACTTGCTCAGATACAGAGAATTAGAGGGAGACAAAGGTCGTCACCACACAGAAATTAATTAA 369 0.4661 MENVGGCCSSSNNEGGGMKEQERLLPIANVGRIMKQILPQNAKISKEAKEMMQECVSEFISFVTSEASDKCRKERRKTLNGDDICWALGTLGFDDYSHPLTRYLLRYRELEGDKGRHHTEIN 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0772 122 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 24 88 IPR003958 -
Bisa02g0772 122 Gene3D Histone, subunit A 16 121 IPR009072 GO:0046982
Bisa02g0772 122 MobiDBLite consensus disorder prediction 1 20 - -
Bisa02g0772 122 SUPERFAMILY Histone-fold 21 119 IPR009072 GO:0046982
Bisa02g0772 122 MobiDBLite consensus disorder prediction 1 17 - -
Bisa02g0772 122 PANTHER CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED 13 114 IPR027113 GO:0001228|GO:0006355|GO:0016602
Bisa02g0772 122 FunFam Nuclear transcription factor Y subunit B-6 13 122 - -
Bisa02g0772 122 PRINTS CCAAT-binding transcription factor subunit A signature 71 89 - -
Bisa02g0772 122 PRINTS CCAAT-binding transcription factor subunit A signature 90 108 - -
Bisa02g0772 122 PRINTS CCAAT-binding transcription factor subunit A signature 52 70 - -
Bisa02g0772 122 ProSitePatterns NF-YB/HAP3 subunit signature. 55 71 IPR003956 GO:0005634|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0772 Bisa-ChrBisa02 13098591 13098959 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0772 18 118 CCAAT-HAP3 Transcription Factor Family AT2G47810 77.228 3.71e-56 170
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YB Bisa02g0772 CBFD_NFYB_HMF 1.3e-27 CL0012