Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0732 ATGATGGGCAACGACGACCCCAACCTCAGGGAATCCGATGCCAAGAGCTATGCCCTCAGCGGCAAGATTATGCTTTGCGCAATCGTCATTTTGTTCTTCGTCGTCATCCTAATGGTTTGCCTCCACCTCTATGCTCGCTGGTTCCTTTTGCGCGCTCGTCGCCGCCAACTCCGCCGCCATCGCCACCACCGTCGCTCCCAACTCGTCTTCTCCATCGACCCCGCCTCTTCTGCCGTGGCCTCGTCGCGCGGCCTCGATTCTTCTCTGCTTTTGTCTCTCCCTGTCTTCGTCTACTCCTTCAAGACCCACCCCGAGGCCTTGGAATGCCCAGTCTGCTTGTCCGAGTTCGAGGAGAGCGAAACGGGTAGGGTATTGCCCAAATGCAACCACAGTTTTCATATTGACTGCATCGACATGTGGTTCAAGACCCACTCCACTTGCCCCCTTTGCAGGGCTCCTGTTGAACCCGCACCAGCTGACGACGCCCGACCCGAAGTTGTGATAACTGTGTGCGAACCGGAAATTCCTGAACCGGGCTCGACTTCTGGGTTGTGCTCGGAGTGTCAGCACCAAGGGGAGGAAGAGAACCGAAACAGCCACGCGGTTTCCTCTTCGTCGTCTTCGATTGGGTTCAAGGGGAAGCCATCGCCCCTCGTGGGTGTGACCGTGGAGGTGCCCAGAAGGAATGAGAGTTTCGGATACGAGTCGGGCTGCGATTCGCCGTCGACTCAGTCGTCGTTTAGGTCGCCGATGAGTCGTATGTTGTCGTTCAAGAGAATGCTTAGCAGAGACCGGAAAGGGAACCTCTCGCCTTCGTCAGGCGGTGCGGCTGGATGCAGCAGCTCTGCGATTGAGGTAGAGAAGGATCGAGGAGGACGAGATGAGACTCAGTGA 894 0.5716 MMGNDDPNLRESDAKSYALSGKIMLCAIVILFFVVILMVCLHLYARWFLLRARRRQLRRHRHHRRSQLVFSIDPASSAVASSRGLDSSLLLSLPVFVYSFKTHPEALECPVCLSEFEESETGRVLPKCNHSFHIDCIDMWFKTHSTCPLCRAPVEPAPADDARPEVVITVCEPEIPEPGSTSGLCSECQHQGEEENRNSHAVSSSSSSIGFKGKPSPLVGVTVEVPRRNESFGYESGCDSPSTQSSFRSPMSRMLSFKRMLSRDRKGNLSPSSGGAAGCSSSAIEVEKDRGGRDETQ 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0732 297 MobiDBLite consensus disorder prediction 231 297 - -
Bisa02g0732 297 CDD RING-H2_EL5-like 108 151 - -
Bisa02g0732 297 SUPERFAMILY RING/U-box 93 157 - -
Bisa02g0732 297 MobiDBLite consensus disorder prediction 198 212 - -
Bisa02g0732 297 Pfam Ring finger domain 108 151 IPR001841 -
Bisa02g0732 297 MobiDBLite consensus disorder prediction 195 218 - -
Bisa02g0732 297 MobiDBLite consensus disorder prediction 235 252 - -
Bisa02g0732 297 ProSiteProfiles Zinc finger RING-type profile. 109 151 IPR001841 -
Bisa02g0732 297 PANTHER RING-H2 FINGER PROTEIN ATL51-RELATED 14 159 IPR044675 -
Bisa02g0732 297 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 74 157 IPR013083 -
Bisa02g0732 297 FunFam RING-H2 finger protein ATL3 76 156 - -
Bisa02g0732 297 SMART ring_2 109 150 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0732 Bisa-ChrBisa02 12448319 12449212 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0732 12 294 Rapid Response to Elicitors AT3G16720 51.667 8.56e-75 229