Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Bisa02g0714 ATGGTTATCTTGGGCAGTTTGTATTTGCTGTCCGGTCTGAAGGAAACTATTCCCTTTCAATCCAAGCTTCTGGATCAACTTGATTGGACAGCGTTTAGGGGGTATTGCTTGAATAGGTTGATGGTTTTCTTTGGATTTGATTGTTTCGCTTGTGGGTTTAAGAACAACTGCACTGTAGCTTATCGAAAAGATATGAAGAACATTCTAAAGAAGCTTCATATCATGTCTAATCAATCAGAAGATGCAGAAGGGTCAACCTCATCAAAAGGCAAGAAGTCCGTTGATGGTTCATTCCCTAAGAAGCTATCGAAATCTCGCTCCCCTCCAAATTCTGAGCATAAAACCTTTTCTGGCCTTTCGAGTTGGTTGCATTCAGTGGCTAATAAGCAGAGTCCTACTCCTCCATCTTCGAATTTGAAAACAGCAGGAAGAATGGAACCATCTGATTCAGTGAGTAGTGGTGGTTTGGATGTTGTTTCAGATTCAGCTGGGCGTGATTCTAGGTCCAGCGCTTCGAGGGATCCTGAAGTAGAGGAAGAGTATCAGATACAACTGGCTTTGGAGATGAGTGCAAAGGAGGATCCAGAAGCAGTGCAGATTGAAGCTATTAAGCAGATAAGTTTGGGTACTTGTGACCCTGATAATACGCCAGCTGAAGTTGTGGCCTACAGATACTGGAATTACAATGTTCTTGGTTATGATGACAAGATCTTGGATGGGTTCTATGATCTCTATGGGATCCTAAGTAAGTCAACCTCTACAAGAATGCCTTCCCTGGTAGATCTACAAGGCACATCAACCGTGGATAGTGTCACGTGGGAAGCGATCTCAGTCAATAGGGCTGCTGATTCTAATTTATTGAACCTTGAGCAAAAAGCCCTGGAGCTGGTGATCAAGTCAAGACCAAATTTTGAAGTAACCGTAGATAGCAATATGGTGCTGAAGCTTGCCATATTAGTAGCTGACTATATGGGAGGGCCAGTTACAGATCCTGAAAGCATGACAAGAGCATGGAGGAGTCTTAGTTATAGTCTGAAAGCAACCCTTGGTAGCATGGTGTTGCCATTAGGTTCTCTGACCATTGGATTGGCTCGGCATCGTGCATTGTTGTTTAAGGTTTTGTCTGATAGTGTGGGCATCCCATGCCGTTTGGTCAAAGGACAACAATATACGGGTTCTGATAATGTGGCAATGAACTTTGTCAAGATTGATGACGAAAGGGAGTACATTGTTGACCTGATGGCAGATCCTGGAACACTTATTCCATCTGATGCAACTGAATCACATGTCGAGTATGAAGAATCTTTCTCTGTGGCCAGTCCTTTGTCAAGAGACCTTGATTCCTCTCGTATAGCATCCTCTAGCAGTGGGGTTGGAAGTTCATCTGAAGAAGCTTCAGACTACGGGGTATTAGATAAAAGAAGAAGATCAAAACATATTGCTTATGCAGACAAAGTATCTGATGTAAGCAGGGCCACTAGAGCTGAAGACGAATCAAAGAGTCCCTTGTATTTTGAAAAGATCATGATGCAGGAAGCTCCTGGTAGACCGTATTACCCAAATCCTCATGCAAGATCTCCTTCTTGGACTGAAGGGATCAGTTCCCCTGCTGTACGTAGAAGGAAAGTTAAAGATGTTTCACAATATATGATTGATGCTGCAATGGAAAATCCTTACTTAGCTCAAAAACTACATGATGTTCTACTGGAAAGTGGTGTTGTTGCTCCTCCAAACTTATTTTCTGAAATTTATTATGAGCAGTTGGGTGCCCCAGTTGTTGAGGCTAACTCCAACACCGAAGAAAAAGAAGACTATAAACTGGAAAGTGGGCAACAGGAAACACAGGTTGATGACAAGCTAAGTCCTGCTCGACTCCTGCCTCCGTTGCCGCCCTACAGAGTTCATCCCAAAACAAGTCGTAGCAGTCAAATGGAGCATTCTAAGCCTGTAGAAGGTTTAGGGATCAACCTTCCTTTTGATACAAGGGAGGCCACTGGACAGCACTTACCATCACATGCAGAAGCAAATCCCGTAAGATATGGGAAAAATGTACCAGTTGCTGCTGCAGCAGCAGCAGCTGCTGCTGTTGTTGCATCTTCGATGGTAGTTGCCGTGGCAAAGTCAGGCACTGACACAAATATTGAGTTTCCAGTTGCAGCAGCAGCTACCGCTACTGCTGCAGCTGTAGTAGCAACCACCGCAGCTGTTAGTAAACAATATGAGCAGGGAAGTCGAAGTGATGGAGATTCTGATGGTGCTAGGGGTAGTGGTCATGGAGAGCAGAGTGTTTTAGTAGCAAACTCAGAAGGCGAGAGAATATCTGATAGATCAGGAAGTAATGACAGCACCAGATCTGATTCTGCACTAGATGATGTTGCTGAGTATGAGATTCCATGGGAGGAAATCACATTGGGTGAACGTATAGGTCTTGGATCATATGGGGAGGTGTACCGTGGTGAATGGCATGGAACTGAAATAGCTGTAAAGAGATTTCTGGATCAAGATATTTATGGTGAATCACTTGAAGAATTCAAAACTGAGGTCCGAATAATGAAAAGACTCAGGCATCCAAATGTTGTTCTCTTCATGGGAGCTGTAACTCGACCTCCAAATCTTTCAATTGTTACAGAATTTCTTCCTAGAGGCAGTTTGTATAGATTAATTCACCGTCCTAACAATCAATTAGATGAGCGAAGGCGACTGAGGATGGCCCTTGATGCTGCTCGAGGAATGAACTATTTGCATAAGTGCTCTCCAGTGATAGTCCATCGTGATTTAAAGTCTCCAAATCTTCTTGTTGATAAAAACTGGGTTGTAAAGGTATGTGATTTTGGACTGTCACGAATGAAGCATAGTACATTCCTTTCTTCAAGATCAACTGCAGGAACAGCTGAGTGGATGGCTCCAGAAGTATTAAGAAATGAACCTTCAAATGAAAAGTGTGATGTTTATAGTTATGGGGTCATTTTATGGGAACTCTCGACGATGAGGCAACCTTGGGGGGGAATGAATCCAATGCAAGTGGTTGGTGCTGTGGGCTTCCAACATCGCCGACTTGAAATTCCAGATGATATGGACCCTGCCATTGCAGATATTATCCGGAAATGCTGGCAGACAGATCCAAAGTTGAGACCCACCTTCGCTGAAATATTGGCGACTCTGAAGCCGTTGCAGAAGCCAATTATTAGTTCTCAATCGCATAGGTCGAGTGCAGCAGCAGGGAGTAGCCATGAGAAGGCTCAGTCATCAAAAGAGGCAGCAGAATAA 3267 0.4371 MVILGSLYLLSGLKETIPFQSKLLDQLDWTAFRGYCLNRLMVFFGFDCFACGFKNNCTVAYRKDMKNILKKLHIMSNQSEDAEGSTSSKGKKSVDGSFPKKLSKSRSPPNSEHKTFSGLSSWLHSVANKQSPTPPSSNLKTAGRMEPSDSVSSGGLDVVSDSAGRDSRSSASRDPEVEEEYQIQLALEMSAKEDPEAVQIEAIKQISLGTCDPDNTPAEVVAYRYWNYNVLGYDDKILDGFYDLYGILSKSTSTRMPSLVDLQGTSTVDSVTWEAISVNRAADSNLLNLEQKALELVIKSRPNFEVTVDSNMVLKLAILVADYMGGPVTDPESMTRAWRSLSYSLKATLGSMVLPLGSLTIGLARHRALLFKVLSDSVGIPCRLVKGQQYTGSDNVAMNFVKIDDEREYIVDLMADPGTLIPSDATESHVEYEESFSVASPLSRDLDSSRIASSSSGVGSSSEEASDYGVLDKRRRSKHIAYADKVSDVSRATRAEDESKSPLYFEKIMMQEAPGRPYYPNPHARSPSWTEGISSPAVRRRKVKDVSQYMIDAAMENPYLAQKLHDVLLESGVVAPPNLFSEIYYEQLGAPVVEANSNTEEKEDYKLESGQQETQVDDKLSPARLLPPLPPYRVHPKTSRSSQMEHSKPVEGLGINLPFDTREATGQHLPSHAEANPVRYGKNVPVAAAAAAAAAVVASSMVVAVAKSGTDTNIEFPVAAAATATAAAVVATTAAVSKQYEQGSRSDGDSDGARGSGHGEQSVLVANSEGERISDRSGSNDSTRSDSALDDVAEYEIPWEEITLGERIGLGSYGEVYRGEWHGTEIAVKRFLDQDIYGESLEEFKTEVRIMKRLRHPNVVLFMGAVTRPPNLSIVTEFLPRGSLYRLIHRPNNQLDERRRLRMALDAARGMNYLHKCSPVIVHRDLKSPNLLVDKNWVVKVCDFGLSRMKHSTFLSSRSTAGTAEWMAPEVLRNEPSNEKCDVYSYGVILWELSTMRQPWGGMNPMQVVGAVGFQHRRLEIPDDMDPAIADIIRKCWQTDPKLRPTFAEILATLKPLQKPIISSQSHRSSAAAGSSHEKAQSSKEAAE 1088
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Bisa02g0714 1088 SMART serkin_6 802 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0714 1088 ProSiteProfiles Protein kinase domain profile. 802 1062 IPR000719 GO:0004672|GO:0005524|GO:0006468
Bisa02g0714 1088 Pfam Protein tyrosine and serine/threonine kinase 802 1054 IPR001245 GO:0004672|GO:0006468
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 449 463 - -
Bisa02g0714 1088 SUPERFAMILY Protein kinase-like (PK-like) 786 1053 IPR011009 -
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 597 613 - -
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 1062 1088 - -
Bisa02g0714 1088 PRINTS Tyrosine kinase catalytic domain signature 962 972 IPR001245 GO:0004672|GO:0006468
Bisa02g0714 1088 PRINTS Tyrosine kinase catalytic domain signature 915 933 IPR001245 GO:0004672|GO:0006468
Bisa02g0714 1088 PRINTS Tyrosine kinase catalytic domain signature 981 1003 IPR001245 GO:0004672|GO:0006468
Bisa02g0714 1088 PRINTS Tyrosine kinase catalytic domain signature 1025 1047 IPR001245 GO:0004672|GO:0006468
Bisa02g0714 1088 PRINTS Tyrosine kinase catalytic domain signature 876 889 IPR001245 GO:0004672|GO:0006468
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 1062 1080 - -
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 449 469 - -
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 738 789 - -
Bisa02g0714 1088 ProSitePatterns Serine/Threonine protein kinases active-site signature. 921 933 IPR008271 GO:0004672|GO:0006468
Bisa02g0714 1088 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 171 1064 - -
Bisa02g0714 1088 Gene3D Transferase(Phosphotransferase) domain 1 881 1066 - -
Bisa02g0714 1088 Pfam Ethylene-responsive protein kinase Le-CTR1 218 421 - -
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 79 93 - -
Bisa02g0714 1088 ProSiteProfiles Ubiquitin-interacting motif (UIM) domain profile. 178 197 IPR003903 -
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 79 181 - -
Bisa02g0714 1088 FunFam Serine/threonine-protein kinase CTR1 881 1064 - -
Bisa02g0714 1088 FunFam Serine/threonine-protein kinase isoform 1 793 880 - -
Bisa02g0714 1088 CDD STKc_MAP3K-like 808 1054 - -
Bisa02g0714 1088 Gene3D Phosphorylase Kinase; domain 1 795 879 - -
Bisa02g0714 1088 ProSitePatterns Protein kinases ATP-binding region signature. 808 829 IPR017441 GO:0005524
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 596 650 - -
Bisa02g0714 1088 MobiDBLite consensus disorder prediction 103 157 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Bisa02g0714 Bisa-ChrBisa02 12118049 12133954 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Bisa02g0714 55 1079 MAP Kinase Kinase Kinase AT1G73660 61.568 0.0 1153
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-2 Bisa02g0714 PK_Tyr_Ser-Thr 1.3e-66 CL0016